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miwipe
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ngsLCA
GNU General Public License v3.0
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problem filtering with edit distance
#33
tothuhien
opened
1 month ago
4
ngsLCA.cpp:60: void mod_db(int*, int*, int2int&, int2char&, int2char&): Assertion `parent.count(out[i])==1' failed
#32
itpcas-zcb
opened
1 month ago
1
ngsLCA with bwa output
#31
tothuhien
closed
10 months ago
2
problems running the test data
#30
slennart
closed
1 year ago
2
install ERROR
#29
guoyuh
closed
1 year ago
3
Fix link to environment.yaml
#28
maxibor
closed
2 years ago
0
Kaiju output file style
#27
miwipe
closed
1 year ago
0
Kaiju output file style
#26
miwipe
closed
2 years ago
0
check input file is sorted by readname
#25
ANGSD
closed
2 years ago
1
Taxa rank otu tables
#24
valentinavan
closed
2 years ago
7
Some fixes to the makefile
#23
genomewalker
closed
2 years ago
0
Segmentation fault (core dumped)
#22
maxibor
closed
2 years ago
13
Compilation error on macOS 11.6
#21
maxibor
closed
2 years ago
0
htslib changes
#20
leholman
closed
3 years ago
0
output plots
#19
miwipe
closed
2 years ago
1
output description
#18
miwipe
closed
2 years ago
0
Update readme
#17
leholman
closed
4 years ago
0
should .log be removed?
#16
ANGSD
closed
4 years ago
1
Updated readme
#15
leholman
closed
4 years ago
0
Updated readme
#14
leholman
closed
4 years ago
0
Updating readme
#13
leholman
closed
4 years ago
0
rm wLCA output
#12
miwipe
closed
4 years ago
0
filtering of best matches reads only
#11
ANGSD
closed
4 years ago
0
make script that parses to krona and to megan
#10
ANGSD
closed
4 years ago
0
extract results above species level
#9
ANGSD
closed
6 years ago
1
add raw sequence to output
#8
ANGSD
closed
6 years ago
1
allow for intervals of edit distance and similarity score
#7
ANGSD
closed
6 years ago
1
Error in MN:i: parsing sequences with MN:i:1 and above have been parsed?
#6
miwipe
closed
6 years ago
1
output print accession number and query sequence length
#5
miwipe
closed
6 years ago
2
make option for input filenames
#4
miwipe
closed
6 years ago
1
check bam flags for the discard of unmapped and low quality reads
#3
ANGSD
closed
6 years ago
1
parse fasta for recalculation of edit distance
#2
ANGSD
closed
4 years ago
0
query sequences
#1
miwipe
closed
6 years ago
1