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monarch-initiative
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dipper
Data Ingestion Pipeline for Monarch
https://dipper.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
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typo
#965
TomConlin
closed
3 years ago
0
NCBI OMIM disease as gene fix
#964
TomConlin
closed
3 years ago
0
ClinVar: two Monarch associations are missing OBAN:association_has_predicate
#963
TomConlin
opened
3 years ago
0
Jenkinsfile & misc comment
#962
TomConlin
closed
3 years ago
0
basic color legend on graphviz diff files
#960
TomConlin
closed
3 years ago
0
InterPro curie for GO
#959
TomConlin
closed
3 years ago
5
Jenkinsfile lowercase 'Stage'
#958
TomConlin
closed
3 years ago
0
hodge-podge
#957
TomConlin
closed
3 years ago
0
Clinvar & incidentals
#956
TomConlin
closed
3 years ago
0
Add biolink category association types
#955
kshefchek
opened
3 years ago
0
omim dipper for mondo missing some classes
#954
cmungall
closed
3 years ago
1
Update rdflib to version 5
#953
kshefchek
closed
3 years ago
1
Get Mondo curies from ClinVar ingest
#952
kshefchek
closed
3 years ago
0
Some ClinVar variants mistyped as compound heterozygous
#951
kshefchek
opened
3 years ago
0
robot and arq pipeline to infer bl categories
#950
kshefchek
closed
3 years ago
1
set ontobio to 1.18.1
#949
kshefchek
closed
3 years ago
1
ZFINSlim standard refactor for columns
#948
TomConlin
closed
3 years ago
0
change OrphaNumber to OrphaCode
#947
TomConlin
closed
4 years ago
0
MPD standard refactor
#946
TomConlin
closed
4 years ago
0
HGNC add default hgnc gene 'in taxon'
#945
TomConlin
closed
4 years ago
1
ZFIN refactor
#944
TomConlin
closed
4 years ago
0
OMIM api backoff
#943
TomConlin
closed
4 years ago
0
OMIM api call delay
#942
TomConlin
closed
4 years ago
0
add mesh to sed hacks
#940
kshefchek
closed
4 years ago
0
Diseases which are also Genes
#961
rgb4268
closed
3 years ago
9
Jenkinsfile minor edits
#939
TomConlin
closed
4 years ago
0
Searching of OWL Axioms across dipper
#938
matentzn
closed
4 years ago
2
Orpha: running baseline with their new schema
#937
TomConlin
closed
4 years ago
0
AnimalQTL BT
#936
TomConlin
closed
3 years ago
1
CTD
#935
TomConlin
closed
4 years ago
0
Orphanet
#934
TomConlin
closed
3 years ago
3
IMPC
#933
TomConlin
closed
4 years ago
0
Skip blank rows in ingested files for MPD ingest
#932
justaddcoffee
closed
4 years ago
0
Fix expected bmq_headers in Ensembl ingest
#931
justaddcoffee
closed
4 years ago
0
HPOA & MGI
#930
TomConlin
closed
4 years ago
1
Emma ingest question
#929
matentzn
closed
3 years ago
6
OMIMPS to match usage in Mondo
#928
kshefchek
closed
4 years ago
2
Fix biogrid id parsing issue
#927
justaddcoffee
closed
4 years ago
1
CTD ingest failing because 1 or more files are behind CAPTCHA wall
#926
justaddcoffee
closed
4 years ago
5
Fix issue parsing gene ids from interactors in BIOGRID mi.txt file
#925
justaddcoffee
closed
4 years ago
11
Revert Gallus gallus URL from Dipper Cache to NCBI URL
#924
justaddcoffee
closed
4 years ago
1
Point Bgee ingest at v14
#923
justaddcoffee
closed
4 years ago
0
announce changes to data file locations
#922
balhoff
closed
4 years ago
6
Missing OMIMPS subClassOfs in omim ttl?
#921
cmungall
closed
3 years ago
7
Global terms label updates mostly
#920
TomConlin
closed
4 years ago
1
MGI alleles without genomic position
#919
pnrobinson
opened
4 years ago
4
MGI refactor for conventions
#918
TomConlin
closed
4 years ago
1
UDP & misc
#917
TomConlin
closed
4 years ago
1
panther - type genes as gene instead of owl:Class
#916
kshefchek
closed
4 years ago
2
Prevent leaking into dataset metadata
#915
justaddcoffee
closed
4 years ago
0
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