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nadeemlab
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SPT
Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images
https://oncopathtk.org
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Update stats
#381
jimmymathews
closed
1 day ago
0
Load testing script
#380
jimmymathews
closed
1 week ago
0
Retain geometric selection in route
#379
jimmymathews
opened
2 weeks ago
0
Increase granularity of version information
#378
jimmymathews
closed
1 month ago
0
Simplify load query
#377
jimmymathews
closed
1 month ago
0
UMAP discrete feature bugfix
#376
jimmymathews
closed
1 month ago
1
Preserve Series and its attributes, and streamline upload procedure doc
#375
jimmymathews
closed
1 month ago
0
Record package versions
#374
jimmymathews
closed
1 month ago
0
Note on upload to s3
#373
jimmymathews
closed
1 month ago
0
Integrate brotli compression feature
#372
jimmymathews
closed
1 month ago
1
create_bimodal_vector may return List instead of Series
#371
CarlinLiao
closed
1 month ago
0
Better logs, and more resilient job queue logic
#370
jimmymathews
closed
1 month ago
2
Database "schemas" consolidation
#369
jimmymathews
closed
1 month ago
0
Better logs
#368
jimmymathews
closed
1 month ago
0
Release v1.0.0
#367
jimmymathews
closed
1 month ago
1
Docs update
#366
jimmymathews
closed
1 month ago
0
Docs update
#365
jimmymathews
closed
1 month ago
0
Add basic documentation to front page
#364
jimmymathews
closed
1 month ago
0
Adds 8-bit float encoder/decoder
#363
jimmymathews
closed
1 month ago
0
Add computation job queue queries
#362
jimmymathews
closed
1 month ago
0
Slight change to umap preprocessing query
#361
jimmymathews
closed
1 month ago
0
API docs
#360
jimmymathews
closed
1 month ago
2
Dependency updates
#359
jimmymathews
opened
1 month ago
0
PostgreSQL schemas (allow simple all-datasets queries)
#358
jimmymathews
closed
1 month ago
4
Adjust import workflow configuration to support S3
#357
jimmymathews
closed
2 months ago
0
Migration from spt-data
#356
jimmymathews
closed
2 months ago
0
Top results on study landing page, solicited from users
#355
jimmymathews
opened
2 months ago
2
Compressed blobs caching
#354
jimmymathews
closed
1 month ago
0
Some docs
#353
jimmymathews
closed
2 months ago
0
Make large datasets subsettable for UMAP
#352
jimmymathews
closed
1 month ago
1
Issue154
#351
jimmymathews
closed
2 months ago
0
Supply UMAP position information as virtual slide
#350
jimmymathews
closed
2 months ago
2
Add findings to study-summary endpoint
#349
franciscouzo
closed
3 months ago
1
Too many null values in computed metrics
#348
jimmymathews
closed
1 month ago
1
Fold findings endpoint into study summary
#347
jimmymathews
closed
3 months ago
0
Fix MIME type header for importance-fraction-plot endpoint
#346
franciscouzo
closed
3 months ago
1
Add nonblocking counts endpoint
#345
jimmymathews
closed
3 months ago
1
Counts endpoint meant for polling
#344
jimmymathews
closed
3 months ago
0
Refine Ripley metric extraction
#343
jimmymathews
closed
3 months ago
0
Fix Ripley metric
#342
jimmymathews
closed
3 months ago
0
Intermittent bug fixes
#341
jimmymathews
closed
4 months ago
2
Speed up with C extensions
#340
jimmymathews
opened
4 months ago
0
Infinite loop checking for completed metric
#339
jimmymathews
closed
4 months ago
2
Vectorize operations on CellDataArrays
#338
CarlinLiao
closed
4 months ago
11
Operations over cell data arrays can be vectorized
#337
CarlinLiao
closed
4 months ago
3
Partial caching
#336
jimmymathews
opened
4 months ago
0
Fix feature duplication bug
#335
jimmymathews
closed
4 months ago
1
Cache GNN plots
#334
jimmymathews
closed
5 months ago
0
Cache GNN plot
#333
jimmymathews
closed
5 months ago
0
Findings URLs
#332
jimmymathews
closed
5 months ago
1
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