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GeneLab_Data_Processing
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[GL_RefAnnotTable] Execution fixes
#128
torres-alexis
opened
6 days ago
0
Metagenomics Illumina Nextflow workflow: Edited README files and accession parameter
#127
olabiyi
closed
6 days ago
0
Microarray Agilent 1-channel workflow updates from v 1.0.3 to 1.0.4
#126
asaravia-butler
closed
1 week ago
0
[GL_RefAnnotTable] Fixes
#125
torres-alexis
closed
1 week ago
0
NF_MAAgilent1ch: Update workflow version from 1.0.3 to 1.0.4
#124
cyouh95
closed
1 week ago
0
[GL_RefAnnotTable] Add Docker/Singularity
#123
torres-alexis
closed
4 weeks ago
0
[GL_RefAnnotTable] Typo fixes
#122
torres-alexis
closed
1 month ago
0
Update GL-DPPD-7107-A.md
#121
bnovak32
closed
1 month ago
0
Update GL-DPPD-7113.md
#120
bnovak32
closed
1 month ago
0
Update GL-DPPD-7113.md
#119
bnovak32
closed
1 month ago
0
[GL_RefAnnotTable] Misc fixes
#118
torres-alexis
closed
1 month ago
0
Metagenomics Nextflow workflow: Added post-processing workflow
#117
olabiyi
closed
1 week ago
0
Update GL-DPPD-7107-A.md
#116
bnovak32
closed
1 month ago
0
NF_MAAffymetrix: Update workflow version from 1.0.4 to 1.0.5
#115
cyouh95
closed
4 weeks ago
0
Update GL-DPPD-7113.md
#114
bnovak32
closed
2 months ago
0
[Microarray Affymetrix] Add support for bacteria annotations
#113
cyouh95
closed
3 weeks ago
0
[BulkRNASeq] VV_DESEQ2_ANALYSIS error with all integer sample names
#112
torres-alexis
opened
2 months ago
0
[BulkRNASeq] Issues with numeric sample names
#111
cyouh95
opened
2 months ago
0
GL_RefAnnotTable-A 1.1.0
#110
torres-alexis
closed
1 month ago
0
Clipping and performance updates
#109
bnovak32
closed
2 months ago
0
performance improvement and clipping
#108
bnovak32
closed
2 months ago
0
[Microarray Affymetrix] Legend covers density plot when sample names are long
#107
cyouh95
closed
3 weeks ago
0
[Microarray Affymetrix] Probe IDs for AFFY HTA 2 0 probes have extra .1 suffix
#106
cyouh95
closed
3 weeks ago
0
[Microarray Affymetrix] MA plots for raw data
#105
cyouh95
closed
3 weeks ago
0
[Microarray] Add option to skip DE step during processing
#104
cyouh95
opened
3 months ago
0
Amplicon 454 ion torrent Nextflow workflow
#103
olabiyi
opened
3 months ago
0
Amplicon Illumina Nextflow workflow: Added Post-processing workflow
#102
olabiyi
opened
3 months ago
0
Metagenomics Illumina Nextflow workflow
#101
olabiyi
closed
2 months ago
0
[Microarray] Factor group column renaming issue when one factor is substring of another
#100
cyouh95
opened
4 months ago
0
[Microarray] Assertion fails in GENERATE_SOFTWARE_TABLE when data files are not compressed
#99
cyouh95
opened
4 months ago
1
[Microarray Affymetrix] Processed data protocol
#98
cyouh95
opened
4 months ago
1
[Microarray] Unintentional renaming of columns causes issues later in selection of columns
#97
cyouh95
opened
4 months ago
0
[Microarray] Issue combining dataframes using bind_rows() when getBM() returns no results
#96
cyouh95
opened
5 months ago
0
Updates for issue #94
#95
bnovak32
closed
3 months ago
0
[Methyl-Seq] Pipeline specifies incorrect input for deduplication step.
#94
bnovak32
closed
1 week ago
0
Metagenomics Remove Human Reads
#93
kieranmbrown
opened
5 months ago
0
NF_MAAgilent1ch: Update workflow version from 1.0.2 to 1.0.3
#92
asaravia-butler
closed
5 months ago
0
NF_MAAffymetrix: Update workflow version from 1.0.3 to 1.0.4
#91
asaravia-butler
closed
5 months ago
0
NF_MAAffymetrix: Update workflow version from 1.0.3 to 1.0.4
#90
cyouh95
closed
5 months ago
0
NF_MAAgilent1ch: Update workflow version from 1.0.2 to 1.0.3
#89
cyouh95
closed
5 months ago
0
Updating to merge master branch updates
#88
asaravia-butler
closed
5 months ago
0
Updating to merge Master branch updates
#87
asaravia-butler
closed
5 months ago
0
[Microarray Affymetrix] Issue loading annotation package in read.celfiles() due to incomplete download
#86
cyouh95
closed
5 months ago
0
[Microarray Agilent 1-channel] Generate processed data protocol
#85
cyouh95
opened
5 months ago
0
[BulkRNASeq] Generate CSV of parsed metrics
#84
cyouh95
opened
5 months ago
0
[BulkRNASeq] Combine MultiQC reports
#83
cyouh95
opened
5 months ago
0
[Microarray] Issue creating cache directories in quarto render command for updated Nextflow version
#82
cyouh95
closed
5 months ago
0
SW_AmpIllumina-B: --target documentation changes
#81
torres-alexis
closed
6 months ago
1
NF Metagenomics RHR
#80
kieranmbrown
closed
5 months ago
1
[Metagenomics Illumina] fix to single-end problem when running with new setup
#79
AstrobioMike
opened
6 months ago
0
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