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GeneLab_Data_Processing
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Microarray workflows integration
#64
asaravia-butler
closed
6 months ago
0
Microarray workflows integration
#63
torres-alexis
closed
6 months ago
0
[Metagenomics Illumina] explicitly setting humann3 reference db locations in rule
#62
AstrobioMike
opened
6 months ago
0
NF_RCP: Remove whitespace in by_docker_image.config
#61
torres-alexis
closed
6 months ago
0
NF_RCP-F_1.0.4
#60
torres-alexis
closed
6 months ago
0
Merging metagenomics branch with updated metagenomics workflow v2.0.4
#59
AstrobioMike
closed
6 months ago
0
SW_AmpIllumina-B: run_workflow.py changes
#58
torres-alexis
closed
6 months ago
0
NF_RCP-F 1.0.4
#57
torres-alexis
closed
6 months ago
0
Incorporation of SW_AmpIllumina-B
#56
torres-alexis
closed
6 months ago
0
Incorporation of SW_AmpIllumina-B
#55
torres-alexis
closed
6 months ago
0
Add both AmpIllumina workflows
#54
torres-alexis
closed
6 months ago
0
Add both AmpIllumina workflows
#53
torres-alexis
closed
6 months ago
0
PR from amplicon-add-runsheet-visualizations dev fork
#52
torres-alexis
closed
6 months ago
0
Document updates
#51
torres-alexis
closed
7 months ago
0
Updated RNA-Seq Pipeline Document
#50
torres-alexis
closed
7 months ago
0
updating amplicon workflow and corresponding docs
#49
AstrobioMike
closed
7 months ago
0
Updating amplicon workflow
#48
AstrobioMike
closed
7 months ago
0
catching up to master
#47
AstrobioMike
closed
8 months ago
0
Update README.md
#46
AstrobioMike
closed
8 months ago
0
merging amplicon branch
#45
AstrobioMike
closed
9 months ago
0
catching up to master
#44
AstrobioMike
closed
9 months ago
0
ENSEMBL annotations not populating correctly
#43
carnold-sjsu
opened
10 months ago
4
[BulkRNASeq] Add V&V Check: Assert adaptor content removed using Trimmed Reads FastQC MultiQC
#42
J-81
opened
11 months ago
0
[BulkRNASeq] Remove generation of visualization extended DGE table
#41
J-81
opened
12 months ago
0
[BulkRNASeq] Update default publish output directory when processing GLDS data
#40
J-81
opened
12 months ago
0
[BulkRNASeq] Handle cases where distinct group names resolve to the same R safe name
#39
J-81
opened
12 months ago
0
[BulkRNASeq] Handle processing with experimental groups where N = 1
#38
J-81
opened
12 months ago
0
Add reference table support for "Pseudomonas Aeruginosa"
#37
J-81
opened
12 months ago
0
[BulkRNASeq] Underspecification of memory for STAR_ALIGN
#36
J-81
opened
1 year ago
0
[BulkRNASeq] Workflow fails to launch using approach 3 when gldsAccession is not supplied
#35
J-81
opened
1 year ago
0
fix[typo]
#34
J-81
closed
6 months ago
1
[BulkRNASeq] V&V program mistypes samplenames as ints when possible
#33
J-81
opened
1 year ago
0
[BulkRNASeq] Handling Technical Replicates
#32
J-81
opened
1 year ago
2
Update GL-DPPD-7114.md
#31
J-81
closed
6 months ago
1
docs: add python and pandas licenses to Microarray
#30
J-81
closed
1 year ago
0
NF_RCP-F_1.0.4-RC1
#29
J-81
opened
1 year ago
0
updating Metagenomics workflow to version 2.0.3
#28
AstrobioMike
closed
1 year ago
1
updating Amplicon workflow to version 1.0.1
#27
AstrobioMike
closed
1 year ago
0
Add reference table support for "Euglena gracilis"
#26
J-81
opened
1 year ago
0
Updating pipeline to process Arabidopsis thaliana studies
#25
J-81
closed
1 year ago
0
Updating pipeline to process Arabidopsis thaliana studies
#24
J-81
closed
1 year ago
2
docs: increase microarray diagram dpi to 300
#23
J-81
closed
1 year ago
1
Parallelize and optimize Wald test and group statistics
#22
J-81
opened
1 year ago
0
Update microarray diagrams
#21
J-81
closed
1 year ago
1
BulkRNASeq workflow should determine adaptor type automatically
#20
J-81
opened
1 year ago
4
docs: sync DPPD with recent updates
#19
J-81
closed
1 year ago
0
feat: add loguru and pandera license information
#18
J-81
closed
1 year ago
0
Update DPPD 7101-F
#17
J-81
closed
1 year ago
1
Release NF_RCP-F_1.0.3 from staging fork
#16
J-81
closed
1 year ago
1
Release NF_RCP-F_1.0.2 from staging fork
#15
J-81
closed
1 year ago
1
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