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ndreey
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ghost-magnet
Molecular Bioinformatics BSc thesis project at University of Skövde
MIT License
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CAMISIM: Configurating config.init
#21
ndreey
opened
1 year ago
2
CAMISIM: Pack up and go
#20
ndreey
opened
1 year ago
1
CAMISIM: Generate the abundance profiles
#19
ndreey
opened
1 year ago
5
CAMISIM: Script that removes unwanted genomes.
#18
ndreey
opened
1 year ago
0
CAMISIM: Estimation of endophytes ratios
#17
ndreey
closed
1 year ago
2
CAMISIM: Game plan
#16
ndreey
opened
1 year ago
0
Sim reads
#15
ndreey
closed
1 year ago
0
Sim reads
#14
ndreey
closed
1 year ago
0
Grasping CAMISIM
#13
ndreey
opened
1 year ago
4
Updated the readme
#12
ndreey
closed
1 year ago
0
Create Nucleotide quality scores (-q1 and -q2)
#11
ndreey
closed
1 year ago
2
Benchmark according to CAMI2
#10
ndreey
opened
1 year ago
2
Dilute mock data with reference.
#9
ndreey
closed
1 year ago
3
Set up conda environment
#8
ndreey
closed
1 year ago
4
Fix unpack_mock.sh as it was only doing samples 0-3
#7
ndreey
closed
1 year ago
0
Built two scripts solving issue 3
#6
ndreey
closed
1 year ago
0
Created scripts that downloads the data and puts it in data/raw
#5
ndreey
closed
1 year ago
0
Create in silico NGS data of Platanthera spp.
#4
ndreey
closed
1 year ago
5
Strip mock samples of A. thaliana
#3
ndreey
closed
1 year ago
1
Get the A. Thaliana reference genome
#2
ndreey
closed
1 year ago
1
Get CAMI2 plant-associated mock data
#1
ndreey
closed
1 year ago
1
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