neuronflow BraTS-Toolkit issues

neuronflow / BraTS-Toolkit

Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.

https://www.frontiersin.org/articles/10.3389/fnins.2020.00125/full

GNU Affero General Public License v3.0

70 stars 11 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Issues Running Segmentation Model on Windows Platform with cuDNN Errors

#62 chocolatetoast-chiu opened 4 weeks ago
1
Update README.md

#61 neuronflow closed 2 months ago
0
- add optional docs requirements

#60 MarcelRosier closed 2 months ago
0
[bug] broken read the docs build

#59 MarcelRosier closed 2 months ago
0
Update .readthedocs.yaml configuration file

#58 MarcelRosier closed 3 months ago
0
rdme update

#57 neuronflow closed 4 months ago
0
BTK for co-registration of pancreatic and lung mri ?

#56 DanielaTalba1 closed 4 months ago
2
blacked and formatted

#55 neuronflow closed 6 months ago
0
[feature request] we want formatted code

#54 neuronflow closed 6 months ago
0
[feature request] typing and docs for segmentation and fusion

#53 neuronflow opened 6 months ago
0
typed and documented preprocessor

#52 neuronflow closed 6 months ago
0
retiring message for preprocessor

#51 neuronflow closed 6 months ago
0
nicer

#50 neuronflow closed 6 months ago
0
comment tests

#49 neuronflow closed 6 months ago
0
Deprecated prep

#48 neuronflow closed 6 months ago
0
[feature request] we want build tests before merging prs

#47 neuronflow closed 6 months ago
0
tests

#46 neuronflow closed 6 months ago
0
Minimal segmentation requirements

#45 BegoneGIT opened 7 months ago
1
questions

#44 neuronflow closed 7 months ago
0
[feature request] we want better and structured issues

#43 neuronflow closed 7 months ago
0
Suppplying less series that required

#42 BegoneGIT closed 7 months ago
5
- fix strict versions

#40 MarcelRosier closed 7 months ago
0
Brats template in nii.gz format and brats atlas (template with segmentations of regions of interest)

#39 DanielaTalba1 closed 7 months ago
4
- fix docker start issue on windows

#38 MarcelRosier closed 7 months ago
0
- migrate pyproject file to poetry

#37 MarcelRosier closed 8 months ago
0
Cli citation reminder

#36 MarcelRosier closed 8 months ago
1
Brats training and pre-process

#35 Luffy03 closed 8 months ago
2
HOW TO INSTALL ANTS FOR BRATS TOOLKIT

#34 DanielaTalba1 closed 8 months ago
3
BraTS preprocessor hangs at t1c ants registration step

#33 KSchmidtACR closed 7 months ago
7
Ability to run BTK without resampling

#32 DanielaTalba1 closed 9 months ago
1
Brats toolkit : status reveived: {'code': 201, 'message': 'scheduling BRATS preprocessing!'}

#31 DanielaTalba1 closed 9 months ago
3
BRATSTOOLKIT EXECUTION ON WINDOWS 10

#30 DanielaTalba1 closed 7 months ago
12
BTK Preprocessor stuck on "running HD-Bet"

#29 c-gamble opened 11 months ago
5
Bump requests from 2.24.0 to 2.31.0

#28 dependabot[bot] closed 8 months ago
1
Update_Citations

#27 ujjwalbaid0408 closed 1 year ago
0
BraTS-preprocess stuck at "status reveived: { 'code': 201, 'message': 'nifti examination queued!'}."

#26 Lucas-rbnt opened 1 year ago
32
Dev/docs

#25 neuronflow closed 1 year ago
0
Dev

#24 IsraMekki0 closed 1 year ago
0
one GitHub repository (unite Git repos)

#23 neuronflow closed 1 year ago
0
source code availability

#22 saimasafdar2021 closed 1 year ago
1
ERROR DETAIL: Preprocessor.__init__.<locals>.connect_error() takes 0 positional arguments but 1 was given

#21 gschramm closed 8 months ago
8
brats-preprocess stuck on "status reveived: {'code': 201, 'message': 'scheduling BRATS preprocessing!'}"

#20 samuelholly closed 8 months ago
3
Can not install this version

#19 PengYida closed 1 year ago
3
support to write .nii files (not .nii.gz)

#18 samuelholly opened 1 year ago
3
Preprocessor stuck on running HD-Bet

#17 chocolatetoast-chiu closed 8 months ago
10
What is the template of BraTS-toolkit?

#16 kyuchoi closed 2 years ago
3
trouble with docker connection

#15 hermanovak closed 1 year ago
8
Preprocessor stuck on PNG slice extraction

#14 aecelaya opened 2 years ago
4
Running on Windows

#13 Gresliebear closed 2 years ago
8
What are the specific preprocessing/standardization steps used for the BraTS challenge?

#12 jayurbain closed 2 years ago
10