nf-core test-datasets issues

nf-core / test-datasets

Test data to be used for automated testing with the nf-core pipelines

https://nf-co.re

MIT License

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issues

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Add 3rd FASTQ file containing UMI sequences for the duplex-seq tiny dataset.

#1201 adamrtalbot closed 6 months ago
2
initial testdata for nf-core/fastquorum

#1200 nh13 closed 6 months ago
0
Add samplesheet_fasta and a new fasta file

#1199 JoseEspinosa closed 6 months ago
0
Fix sample group to match sample filename

#1198 Aratz closed 6 months ago
1
Reduce size of KU database

#1197 jfy133 closed 6 months ago
0
Add KrakenUniq databases

#1196 jfy133 closed 6 months ago
0
Seqinspector testdata - Change "project" to "group" and add .gz extension to ONT testdata

#1195 kedhammar closed 6 months ago
0
Add pipeline test data for `nf-core/tfactivity`

#1194 nictru closed 6 months ago
0
added tar.gz of database for eager2 test profile

#1193 ilight1542 closed 7 months ago
0
Add SARS-CoV2 KrakenUniq database files

#1192 jfy133 closed 6 months ago
0
Added test data for propagate modules

#1191 CarsonJM closed 7 months ago
1
Create `samplesheet_reduced_preannotated.csv`

#1190 jasmezz closed 7 months ago
0
Add datasets for ampcombi/complete

#1189 Darcy220606 closed 7 months ago
0
Test sample sheet for teh pairgenomealign pipeline

#1188 U13bs1125 closed 6 months ago
2
added transcriptome bams for riboseq

#1187 iraiosub closed 7 months ago
2
Update spatialtranscriptomics test data documentation

#1186 fasterius closed 7 months ago
0
Change pipeline name to nf-core/spatialvi

#1185 fasterius closed 7 months ago
2
Add fake spikes file for testing with deseq2

#1184 pinin4fjords closed 7 months ago
1
Add 4plex_ffpe cellranger multi dataset

#1183 fmalmeida closed 7 months ago
0
Add kraken2 intermediate archive

#1182 jfy133 closed 7 months ago
0
Update ID variants

#1181 LouisLeNezet closed 7 months ago
0
Phaseimpute

#1180 LouisLeNezet closed 7 months ago
0
Phaseimpute fix individuals name

#1179 LouisLeNezet closed 7 months ago
0
Add barcode and bam index file for demultiplexing

#1178 wxicu closed 7 months ago
1
Update all files and add imputed files with glimpse2

#1177 LouisLeNezet closed 7 months ago
0
Added gene models for actinidia_chinensis chr1

#1176 GallVp closed 6 months ago
2
Add PLINK 2 simulated binary files

#1175 eweizy closed 7 months ago
0
Add riboseq matrix test data

#1174 pinin4fjords closed 7 months ago
1
Add barcodes.tsv file required to run test dataset with scsplit

#1173 IreneRobles closed 7 months ago
3
Taxprofiler: Update databases to include db_type

#1172 LilyAnderssonLee closed 7 months ago
0
Micro sample sheet

#1171 pinin4fjords closed 7 months ago
1
Add test datasets for ampcombi_0.2

#1170 Darcy220606 closed 8 months ago
3
Add dedicated 'metagenome' organism directory with metagenome related files

#1169 jfy133 closed 7 months ago
2
Omics s3 2024

#1168 drernie closed 8 months ago
0
Single-Cell Hashing demultiplexing

#1167 mari-ga closed 8 months ago
1
added test files for lexogen idemux tool

#1166 jaanckae closed 8 months ago
1
Add CheckM2 tsv

#1165 erikrikarddaniel closed 8 months ago
0
Adding duplicate to GTDB metadata

#1164 erikrikarddaniel closed 8 months ago
0
Small test data for SeqInspector pipeline

#1163 KarNair closed 7 months ago
7
Update multiplesequencealign full samplesheet

#1162 JoseEspinosa closed 8 months ago
0
Adding BLAST-indexed database for SARS-CoV-2 proteome FASTA

#1161 toniher closed 8 months ago
0
Adding GTDB test tsv

#1160 erikrikarddaniel closed 8 months ago
0
Added sample datavzrd config files

#1159 vickylaram closed 5 months ago
2
Added example config files for Datavzrd module

#1158 vickylaram closed 8 months ago
0
test data for velocyto module

#1157 tucano closed 8 months ago
1
Adding CheckM data

#1156 erikrikarddaniel closed 8 months ago
0
Adding test GTDB metadata

#1155 erikrikarddaniel closed 8 months ago
0
Add test.bedpe to sarscov2 repo

#1154 Krannich479 closed 8 months ago
1
Plink simulated phenotype file with header

#1153 LorenzoS96 closed 8 months ago
0
Plink simulated phenotype file with header

#1152 LorenzoS96 closed 8 months ago
0

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