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nf-microbe
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toolkit
A Nextflow toolkit for running microbe-related analyses that follows nf-core best practices.
MIT License
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Dev
#29
CarsonJM
closed
3 days ago
0
Updated CHANGELOG
#28
CarsonJM
closed
3 days ago
0
Release 0.4-beta
#27
CarsonJM
closed
3 days ago
0
24 04 beta
#26
CarsonJM
closed
3 days ago
0
TOOLKIT: Add broken up pipeline tests
#25
CarsonJM
opened
4 days ago
0
TOOLKIT: Release 0.4-beta
#24
CarsonJM
closed
3 days ago
1
FIxed json schema url
#23
CarsonJM
closed
3 weeks ago
0
Prepare for release 0.3-beta
#22
CarsonJM
closed
3 weeks ago
0
Added download options, fixed checkvgenbank hits, and update uw_hyak …
#21
CarsonJM
closed
3 weeks ago
0
TOOLKIT: Prepare release 0.3
#20
CarsonJM
closed
3 weeks ago
0
Updated Changelog
#19
CarsonJM
closed
3 weeks ago
0
Release 0.2.0
#18
CarsonJM
closed
3 weeks ago
0
Assembly extension, assembly qc, mge classification, virus completeness
#17
CarsonJM
closed
3 weeks ago
1
TOOLKIT: Finalize release 0.2.0
#16
CarsonJM
closed
3 weeks ago
0
TOOLKIT: Add virus quality
#15
CarsonJM
closed
3 weeks ago
0
TOOLKIT: MGE identification
#14
CarsonJM
closed
3 weeks ago
0
TOOLKIT: Add assembly extension
#13
CarsonJM
closed
3 weeks ago
0
TOOLKIT: Prepare first release
#12
CarsonJM
closed
1 month ago
0
Update dev to match master
#11
CarsonJM
closed
1 month ago
0
Update changelog
#10
CarsonJM
closed
1 month ago
0
Updated changelog and pipeline version
#9
CarsonJM
closed
1 month ago
0
Update changelog and pipeline version for 1st release
#8
CarsonJM
closed
1 month ago
1
Fixed CI causing duplicate actions to be run on PR to master
#7
CarsonJM
closed
1 month ago
0
Add read preprocessing and read asembly functionality to prepare for first release
#6
CarsonJM
closed
1 month ago
0
Update CI to only run nf-test when changes are made to pipeline
#5
CarsonJM
closed
1 month ago
0
Add read assembly functionality
#4
CarsonJM
closed
1 month ago
1
TOOLKIT: Add read assembly
#3
CarsonJM
closed
1 month ago
0
1 add read preprocessing functionality
#2
CarsonJM
closed
1 month ago
1
TOOLKIT: Add read preprocessing
#1
CarsonJM
closed
1 month ago
0