nipreps mriqc issues - Githubissues

nipreps / mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

http://mriqc.readthedocs.io

Apache License 2.0

299 stars 132 forks source link

issues

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Review NMIND Checklist submitted and provide corrections if desired

#1362 LuciMoore opened 1 day ago
0
mriqc 24.0.2 crash

#1360 bpinsard closed 3 weeks ago
1
Provide a range of years ending with current for the copyright statement

#1359 yarikoptic opened 1 month ago
0
Multi-shell DTI report showing same SNR for best and worst volumes

#1358 HQHuang opened 1 month ago
0
FIX: Containers report wrong version

#1357 oesteban opened 2 months ago
0
FIX: Passing ``bytes`` into ``str.join()``

#1356 oesteban closed 2 months ago
0
Updated SBATCH script for MRIQC protocol manuscript

#1355 mckenziephagen opened 2 months ago
0
BUG: puzzling erroneous version reporting in docker

#1354 bpinsard opened 2 months ago
4
Can't run mriqc group analysis on a subset of the sample (separate echos)

#1353 caaam3 opened 2 months ago
3
Exception raised while executing Node _UploadMetric

#1352 DVSneuro opened 2 months ago
4
FIX: Optimize interface to minimize memory fingerprint

#1351 oesteban closed 2 months ago
0
Node ``mriqc.interfaces.functional.Spikes`` is a memory hog

#1350 oesteban opened 2 months ago
0
Add a HPC troubleshooting section to the documentation

#1349 vferat opened 2 months ago
2
Apply ruff 0.6

#1348 DimitriPapadopoulos closed 2 months ago
3
ENH: Add license NOTICE to start banner

#1343 oesteban closed 3 months ago
0
FIX: Pin latest *NiReports* release (24.0.2) addressing ``fMRIPlot`` issues

#1342 oesteban closed 3 months ago
0
ENH: Enable writing crashfiles in compressed-pickle format

#1339 oesteban closed 3 months ago
0
FIX: Edge artifacts in first and last slices due to interpolation

#1338 oesteban closed 3 months ago
0
ENH: Use ``orjson`` to serialize JSON, addressing Numpy serialization issues

#1337 oesteban closed 3 months ago
0
ENH: Handle WebAPI timeouts more gently

#1336 oesteban closed 3 months ago
0
DWI pipeline -- ``RuntimeWarning``

#1333 oesteban opened 3 months ago
2
FIX: Normalize bids-filters' modality keys to be lowercase

#1332 oesteban closed 3 months ago
0
BIDS filters apparently not working for T1w and T2w

#1331 oesteban closed 3 months ago
0
FIX: Remove unreachable code within DWI pipeline

#1328 oesteban closed 3 months ago
0
FIX: Revise bugfix #1324

#1327 oesteban closed 3 months ago
0
MAINT: Remove *Pandas*'s ``FutureWarning``

#1326 oesteban closed 3 months ago
0
FIX: Limit IQMs' node number of processes and therefore, memory

#1325 oesteban closed 3 months ago
0
FIX: Resolve numeric overflow in drift estimation node

#1324 oesteban closed 3 months ago
1
FIX: Address memory issues in DWI pipeline

#1323 oesteban closed 3 months ago
0
FileNotFoundError during funcMRIQC processing

#1322 suxpert closed 3 months ago
4
STY: Format jupyter notebooks

#1321 oesteban closed 3 months ago
0
FIX: Address memory issues by limiting BigPlot's parallelization.

#1320 oesteban closed 3 months ago
0
Error with metric upload to API

#1319 mckenziephagen closed 2 months ago
6
Avoid unexpected exists when performing T1w images with low qualities

#1318 Clancy-wu opened 3 months ago
4
ENH: Crawl dataset's metadata only once and before Nipype's workflow

#1317 oesteban closed 3 months ago
6
Multi-echo BOLD pipeline: potential waste relating/after metadata extraction

#1316 oesteban closed 3 months ago
0
Numeric overflow when computing drift on int16 DWI (that has slope)

#1315 psadil closed 3 months ago
0
MAINT: Remove redundant licence definition

#1314 DimitriPapadopoulos closed 3 months ago
7
ENH: Leverage new spun-off apply interface

#1313 oesteban closed 3 months ago
0
ENH: Update to new NiTransforms' ``apply()``

#1312 oesteban closed 3 months ago
0
ENH(dMRI): Deal gracefully with small CC masks

#1311 oesteban closed 3 months ago
3
MAINT: Flexibilize pandas pinned version

#1310 oesteban closed 3 months ago
0
FIX: Set ``n_procs`` instead of ``num_threads`` on node ``apply_hmc``

#1309 oesteban closed 4 months ago
1
Incorrect setting of `num_threads` instead of `n_procs` on nipype node

#1308 oesteban closed 4 months ago
0
Is it possible to not hardcode HOME in Dockerfile?

#1307 yarikoptic opened 4 months ago
3
DOC: add to the documentation what summary_fg means

#1306 celprov closed 3 months ago
2
IQMs for DWI report

#1305 dkp opened 5 months ago
0
non-readable python files in a container

#1304 yarikoptic opened 5 months ago
3
T2w and acq-hippo_T2w mixed up in report

#1303 dkp opened 5 months ago
5
DWI bids compliant but MRIQC cannot process

#1302 dkp closed 3 months ago
17