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nrnb
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GoogleSummerOfCode
Main documentation site for NRNB GSoC project ideas and resources
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Implement a python library for GraphSpace RESTful APIs
#90
adbharadwaj
closed
7 years ago
1
Develop a Web Application for the EnrichmentMap Workflow
#89
cannin
closed
4 years ago
13
Develop a Generic Converter for Importing Data into Pathway Commons
#88
cannin
closed
4 years ago
2
SBOL integration for IBW
#87
harfel
closed
6 years ago
1
Time series data visualization in Escher
#86
zakandrewking
closed
6 years ago
13
Issue template
#85
maxkfranz
closed
7 years ago
0
Popper.js extension for Cytoscape.js
#84
maxkfranz
closed
6 years ago
10
jupyter-cytoscape : Adding support in Jupyter notebooks for Cytoscape.js
#83
maxkfranz
closed
5 years ago
6
Develop a web service which provides simulation / steady state analysis / parameter estimation with SBML models
#82
funasoul
closed
7 years ago
12
Develop a converter for SBML spatial models
#81
funasoul
closed
6 years ago
7
Enable browsing of SBOL Stack instances on ICE Web of Registries
#80
hplahar
closed
6 years ago
1
Improve the ICE DNA sequence data model to be compatible with SBOL 2 data standard
#79
hplahar
closed
6 years ago
4
Please add me to repo
#78
0u812
closed
7 years ago
0
Develop a Cluster Computing Framework for Dynamical Modeling
#77
0u812
closed
7 years ago
25
Improve handling of time series and similar in Cytoscape
#76
martinmodrak
closed
6 years ago
11
Develop a Synthetic Biology Publication Workflow that Leverages the Synthetic Biology Open Language
#75
cjmyers
closed
7 years ago
2
Beautiful rendering of complex genetic designs in Python with DNAplotlib and the Synthetic Biology Open Language (SBOL)
#74
chofski
closed
6 years ago
20
Add ARM (Raspberry Pi) LLVM Support to High Performance Simulator libRoadRunner
#73
hsauro
closed
3 years ago
26
Add SBOL Import and Export Capabilities to the Synthetic Biology Tool TinkerCell
#72
hsauro
closed
4 years ago
5
Cytoscape.js extension for querying large networks
#71
ugurdogrusoz
closed
7 years ago
11
netDx: Implement GeneMANIA in Julia to optimize for high-performance computing
#70
shraddhapai
closed
7 years ago
6
Improvements in tool for curating biological maps in SBGN
#69
ugurdogrusoz
closed
7 years ago
2
SBML Distributions: incorporating descriptions of probability distributions
#68
skeating
closed
7 years ago
5
Interconversion between SBML layout and SBGN-ML
#67
draeger
closed
7 years ago
2
libGPML- library to read and write GPML files
#66
mkutmon
closed
7 years ago
2
Toolbox for systems biology model building and slicing
#65
draeger
closed
3 years ago
8
Implement Network Quantity Information measure in CEntiScaPe
#64
giovanniscardoni
closed
7 years ago
5
Developing a web interface for DoMo-Pred, the protein interactions prediction tool
#63
MoHelmy
closed
7 years ago
35
Adding support for PSIMI-TAB format to the Disease Variant Impact (DV-IMPACT) Database
#62
MoHelmy
closed
7 years ago
40
Scalable vector graphics as an export option for Cytoscape.js
#61
ugurdogrusoz
closed
4 years ago
6
Web based SBGN editor
#60
ugurdogrusoz
closed
8 years ago
3
Visual biology with Escher
#59
draeger
closed
8 years ago
9
Structural similarity network tool
#58
AlexanderPico
closed
8 years ago
1
Machine learning for CentiScaPe
#57
giovanniscardoni
closed
5 years ago
4
Enhance Cytoscape command-line scripting
#56
scootermorris
closed
8 years ago
5
Multithread Centiscape
#55
giovanniscardoni
closed
8 years ago
3
PiType: A protein interaction type prediction cytoscape app.
#54
fgoebels
closed
7 years ago
5
ELUDE: A cytoscape app for generating protein interaction networks from co-fractionation data.
#53
fgoebels
closed
7 years ago
1
Develop and deploy cyTRON: an application to show and explore cancer progression models
#52
marcoxa
closed
7 years ago
12
Finish and deliver a GPU-based rendering engine for Cytoscape
#51
bdemchak
closed
7 years ago
9
Loading Expression Data into Cytoscape to Integrate with Biological Networks
#50
bdemchak
closed
3 years ago
1
Create cloud-based graph/network layout algorithms for the new Cytoscape Cyberinfrastructure
#49
bdemchak
closed
5 years ago
3
Enable migration of graphs and networks from Gephi to Cytoscape
#48
bdemchak
closed
8 years ago
1
Metabolite structure visualization in Pvjs
#47
egonw
closed
6 years ago
11
Metabolite plugin for PathVisio
#46
egonw
closed
6 years ago
1
Implement Principal Coordinate Analysis in clusterMaker
#45
scootermorris
closed
8 years ago
3
Implement a Cytoscape App to generate a legend as part of the network
#44
scootermorris
closed
6 years ago
2
Visualization of Time-series Cluster Data
#43
scootermorris
closed
3 years ago
3
Implementation of new clustering algorithms in clusterMaker
#42
scootermorris
closed
4 years ago
14
Constrained layout algorithms in Cytoscape
#41
scootermorris
closed
5 years ago
6
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