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parklab
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bamsnap
MIT License
108
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Works with your test data but not with mine
#35
jdenavascues
opened
5 months ago
0
Sort and color by tag
#34
regevs
opened
5 months ago
0
ValueError: y1 must be greater than or equal to y0
#33
SeongGyuKwon
opened
6 months ago
2
IndexError: string index out of range
#32
shin0727
opened
1 year ago
1
More of a question.
#31
Pharmacogenetecist
closed
1 year ago
0
Specify custom annotation track?
#30
ayaanhossain
opened
2 years ago
0
Plotting in Jupyter via library API?
#29
ayaanhossain
opened
2 years ago
0
fix image names
#28
nr23730
opened
2 years ago
0
bamsnap runs into error when `-process` option is used
#27
ManavalanG
opened
2 years ago
0
PacBio CCS reads support
#26
sjin09
opened
2 years ago
3
Runs into error with genomic region size in megabases
#25
ManavalanG
opened
3 years ago
1
Programatic use
#24
iiSeymour
opened
3 years ago
0
Would you please support mm10?
#23
shengqh
opened
3 years ago
4
Bamsnap can't recognize lower case letters in reference genomes
#22
SeongGyuKwon
opened
3 years ago
0
HTML created for multi-sample snaps can't load the snaps
#21
B3rse
opened
3 years ago
2
KeyError on RNA-seq data
#20
simoncchu
opened
3 years ago
2
support for reference sequences with lowercase characters (a, c, g, t)
#19
tkonopka
opened
3 years ago
0
reference sequence with lowercase characters
#18
tkonopka
opened
3 years ago
0
No html or zip output created with multiple threads
#17
alxsimon
closed
3 years ago
2
Disabling .txt and .log output files
#16
cbrueffer
closed
3 years ago
1
Unclear error when using BAM from Nanopore data
#15
mcortes-lopez
opened
3 years ago
3
Error about reference index
#14
sylee623
opened
3 years ago
2
Cant manage to get working with alternative FASTA
#13
ebioman
opened
3 years ago
6
How to `sort by base`?
#12
xiucz
opened
3 years ago
1
How to run with custom reference (es assembly)
#11
telatin
opened
3 years ago
0
bioconda
#10
pmenzel
closed
3 years ago
2
Bump pillow from 2.0.0 to 7.1.0
#9
dependabot[bot]
closed
3 years ago
1
CRAM support
#8
danielmsk
closed
3 years ago
0
CRAM support?
#7
mvelinder
closed
3 years ago
2
edited docs
#6
B3rse
closed
3 years ago
0
ValueError: MD tag not present
#5
danielmsk
closed
3 years ago
1
Add `-show_soft_clipped` to show soft-clipped part of reads
#4
danielmsk
closed
3 years ago
1
Convert pileup-base retrieval to fetch-based retrieval in DrawReadSet class of drawreadset.py
#3
danielmsk
closed
3 years ago
1
Read color by inter-chromosomal rearrangement
#2
danielmsk
closed
3 years ago
1
Hg19 debug
#1
danielmsk
closed
3 years ago
0