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pblischak
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HyDe
Hybridization detection using phylogenetic invariants
http://hybridization-detection.readthedocs.io
GNU General Public License v3.0
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Curious About Gene Flow Direction in Hybrid Detection Results of HyDe
#43
Jhe1004
opened
3 months ago
1
Question about Gamma
#42
Wennie-s
opened
10 months ago
0
Interpretation of bootstrap results
#41
pmomadeira
opened
1 year ago
1
how to determine the hybrid species in the result of exhaustive search
#40
bettermaan
opened
1 year ago
1
the significant results means tested species is a hybrid or just have gene flow?
#39
CrawlingSponge
opened
1 year ago
4
Question about the
#38
Orz-CQ
opened
1 year ago
9
why my results gamma were nan and the AAAA AAAB ......were 0.0？
#37
yuanjigui
opened
1 year ago
3
Why my gamma were nan ？
#36
yuanjigui
closed
1 year ago
1
WHY
#35
yuanjigui
closed
1 year ago
4
please，what function these ？Does it affect the results？
#34
yuanjigui
closed
1 year ago
3
run_hyde.py -i data.txt -m map.txt -o out -n 16 -t 4 -s 50000
#33
yuanjigui
closed
1 year ago
1
fixed indexing typo (#23)
#32
pblischak
closed
1 year ago
0
Revisit package requirements and build instructions
#31
pblischak
opened
1 year ago
0
Unable to understand the result
#30
tanwei123456
closed
1 year ago
3
Installation of HyDe : problem in make test
#29
snehasjoshi
opened
1 year ago
2
fileSegmentation fault (core dumping)
#28
gyq-123
opened
1 year ago
1
Different order of map.txt generate different results
#27
zhangzhiyangcs
closed
2 years ago
3
Segmentation fault -- empty lines error
#26
cblair81
opened
2 years ago
1
Does HyDe could identify Degenerte Nucleotide Codes?
#25
zhangzhiyangcs
closed
2 years ago
2
Segmentation fault (unknown reason)
#24
bmichanderson
closed
2 years ago
2
Possible typo?
#23
bmichanderson
closed
1 year ago
2
Can SNP data of only mutation sites be used as input data
#22
syauwjl
opened
3 years ago
1
segmentation fault
#21
rakeuler
closed
3 years ago
6
"number of sites specified is not equal to number of sites in data file"
#20
rakeuler
closed
3 years ago
1
confused results of gamma
#19
sandyplus
opened
3 years ago
1
Input need to filter minor allele frequence SNP?
#18
sandyplus
opened
3 years ago
1
Gamma values > 1.0 and negative Z scores
#17
burbrink
opened
3 years ago
2
About the introgression detect using hyde
#16
Jhe1004
closed
3 years ago
3
How should I convert VCF to Phylip format?
#15
silvewheat
closed
3 years ago
4
HyDe is installed while make test does not worked
#14
Yung-Chien
opened
4 years ago
3
Phased data
#13
kyleaoconnell22
opened
4 years ago
5
issue running setup.py install
#12
angelajmcd
closed
5 years ago
3
Graphical User Interface Beta Testers
#11
pblischak
opened
5 years ago
1
docstring of run_hyde.py
#10
hannesbecher
closed
5 years ago
2
KeyError regarding outgroup
#9
ClaudiaPaetzold
closed
5 years ago
4
OverflowError: value too large to convert to int
#8
ethering
opened
5 years ago
2
Installation error - seaborn missing
#7
ethering
closed
5 years ago
3
HyDe is installed but the test does not work
#6
arturomarin
closed
5 years ago
7
Segmentation fault
#5
RSchley
closed
6 years ago
4
Exception KeyError
#4
stsmall
closed
6 years ago
3
Not all triples evaluated
#3
SheaML
closed
6 years ago
2
file path handling
#2
pblischak
closed
6 years ago
1
Installation error
#1
SheaML
closed
7 years ago
4