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pha4ge
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pipeline-resources
Bioinformatics Pipeline and Visualization resources
https://pha4ge.org/bioinformatics-pipelines-and-visualization/
Apache License 2.0
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TB Reference Compilation
#57
frankambrosio3
opened
1 week ago
0
Add flu guidance doc link to readme
#56
emily-smith1
opened
1 week ago
0
add table of contents to the hiv guidance doc
#55
frankambrosio3
closed
2 weeks ago
0
Issue and Pull Request Submission Guide
#54
frankambrosio3
opened
3 weeks ago
0
Update hiv-bioinfo-solutions.md
#53
MarcNiebel
closed
1 month ago
2
Fixes Cinnetcrash patch 1 influenza bioinfo doc updatev1.0 #50
#52
tralynca
closed
1 month ago
0
Influenza Guidance Document - Request for feedback
#51
cinnetcrash
opened
1 month ago
0
Creation of influenza-bioinfo-solutions.md
#50
cinnetcrash
closed
1 month ago
3
HIV Guidance Document - Workflows for HIV analysis
#49
frankambrosio3
opened
1 month ago
0
46 hiv guidance document add references for bioinformatics tools
#48
MarcNiebel
closed
1 month ago
0
Zotero reference library removal and table update
#47
MarcNiebel
closed
2 months ago
1
HIV Guidance Document - Add references for Bioinformatics Tools
#46
frankambrosio3
closed
1 month ago
0
HIV Guidance Document - Add references for Bioinformatics Tools
#45
frankambrosio3
closed
1 month ago
0
Test PR
#44
frankambrosio3
closed
2 months ago
0
Update README.md
#43
emily-smith1
closed
1 month ago
0
HIV Guidance Document-Table mixup in R markdown
#42
MarcNiebel
closed
3 months ago
3
HIV Guidance Document - Modify Zotero citations so they're compatible with GitHub markdown
#41
gaskinae
closed
2 months ago
1
HIV Guidance Document - Add a Table of Contents
#40
frankambrosio3
closed
2 weeks ago
1
HIV Guidance Doc - Markdown formatting of Case Studies Section
#39
frankambrosio3
closed
1 month ago
0
Initial HIV guidance document PR
#38
frankambrosio3
closed
3 months ago
0
HIV Bioinfo Solutions Document
#37
frankambrosio3
closed
3 months ago
1
HIV Guidance Doc
#36
frankambrosio3
closed
3 months ago
0
Update pipeline-standards.md
#35
frankambrosio3
closed
4 months ago
0
Focus Shift to Pipelines Best Practices
#34
kevinlibuit
closed
3 months ago
1
Observations about Proposed Standards for Public Health Bioinformatics Software
#33
svarona
opened
6 months ago
0
added standards criteria and validation
#32
frankambrosio3
closed
4 months ago
0
Add max commitment duration
#31
kevinlibuit
closed
6 months ago
0
Definition of how to meet and verify standards
#30
frankambrosio3
opened
7 months ago
0
Create proposed standards doc
#28
kevinlibuit
closed
11 months ago
0
Include MicrobeTrace as a bioinformatics solution for Mpox
#27
roxycintron
opened
1 year ago
0
Added nf-core/viralrecon to CLI tools
#26
svarona
closed
1 year ago
1
Add CLI tool ViralConsensus
#25
bede
closed
1 year ago
1
Dashboarding guidance doc
#24
kevinlibuit
opened
1 year ago
0
MPOX guidance document updates
#23
kevinlibuit
opened
1 year ago
0
Guidance for SC2 WasteWater Sequencing
#22
kevinlibuit
opened
1 year ago
0
Monkeypox Resources
#21
jamietyger
closed
1 year ago
0
Bioinformatics Pipeline Standards and Review Process
#20
kevinlibuit
opened
1 year ago
3
MPXV Guidance Document
#19
kevinlibuit
closed
1 year ago
0
AMR Guidance Doc
#18
kevinlibuit
opened
1 year ago
0
Add SC2 Recombinant Guidance Document
#17
kevinlibuit
closed
2 years ago
0
Guidance document on verifying recombination lineages
#16
kevinlibuit
closed
1 year ago
1
Create qc-solutions.md
#15
jamietyger
closed
2 years ago
0
Publish QC Guidance Document
#14
kevinlibuit
closed
1 year ago
4
Update Bioinformatics Solutions for SARS-CoV-2 Genomic Analysis
#13
kevinlibuit
opened
2 years ago
0
Update Omicron Document Needed
#12
kevinlibuit
closed
1 year ago
1
Omicron updates
#11
kevinlibuit
closed
2 years ago
1
Omicron resource updates
#10
kevinlibuit
closed
2 years ago
8
Discuss masking and handling of low quality data
#9
dmaccannell
opened
2 years ago
1
Adds MA omicron reads link
#8
bwlang
closed
2 years ago
1
Omicron Variant Guidance Doc
#7
kevinlibuit
closed
2 years ago
0
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