phenopolis phenopolis_genomics_browser issues

phenopolis / phenopolis_genomics_browser

Python API and React frontend for the Phenopolis Genomics Browser

https://dev-live.phenopolis.org

MIT License

31 stars 2 forks source link

issues

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Bump black from 19.10b0 to 24.3.0

#394 dependabot[bot] closed 3 months ago
1
Build error - not possible to update website at the moment

#393 pontikos opened 1 year ago
0
Future proofing maintenance with pre-commit

#392 alanwilter closed 2 years ago
1
Use dynamic year for copyright

#391 alanwilter closed 2 years ago
1
update copyright with js to 2022 on dev-live

#390 pontikos closed 2 years ago
1
How pagination should work from the frontend perspective?

#389 alanwilter opened 2 years ago
3
Pagination for patient's variants

#388 alanwilter opened 2 years ago
1
Flex uploader

#386 alanwilter opened 2 years ago
1
Hide external_id for demo

#385 alanwilter closed 2 years ago
1
Hide External_id for demo user

#384 alanwilter closed 2 years ago
0
API dev is down -

#383 IsmailM closed 2 years ago
3
Flex "upload" function so users can define local system instead of S3

#382 alanwilter opened 2 years ago
4
Add info/slides about "how data import framework works" in Phenopolis google drive doc

#381 alanwilter opened 2 years ago
0
Create 3 pages like myPatient page showing all user available genes/hpo/variant

#380 alanwilter opened 2 years ago
0
To close #169 by adding endpoint 'my_hpos'

#379 alanwilter closed 2 years ago
3
Able to use either local or S3 remote vcf file

#378 alanwilter closed 2 years ago
1
Print debug info when dealing with vcf file

#377 alanwilter closed 2 years ago
1
Make it easier for everyone to install

#376 IsmailM opened 2 years ago
2
Migration of autocomplete to new DB schema

#375 alanwilter closed 2 years ago
2
Migrate gene to new schema

#374 alanwilter closed 3 years ago
2
add fix for yarn install

#373 IsmailM closed 3 years ago
1
Proofreading Dashboard page

#372 alanwilter opened 3 years ago
0
Refactoring API for using DB new schema

#371 alanwilter closed 2 years ago
2
Move text on Dashboard to translation.json

#370 IsmailM opened 3 years ago
0
Add example page links on the Dashboard

#369 IsmailM opened 3 years ago
2
Skeleton for Translation

#368 IsmailM opened 3 years ago
0
Change Password

#367 IsmailM opened 3 years ago
0
Frontend packages/ docker updates

#366 IsmailM closed 3 years ago
1
Safer demo for variant page

#365 alanwilter closed 3 years ago
0
add pontikos-lab to footer

#364 pontikos opened 3 years ago
1
Safer variant page for demo

#363 alanwilter closed 3 years ago
1
demo user gene message is misleading

#362 pontikos opened 3 years ago
0
"Can not Fetch preview information" message should be "You are not permitted to view this patient"

#361 pontikos opened 3 years ago
2
change password for demo user needs to handle permission error

#360 pontikos opened 3 years ago
0
Very long variants should be trimmed on page

#359 pontikos opened 3 years ago
3
Added Skeleton to replace all loading. Except Auth and Translation lo…

#358 YuanTian1991 closed 3 years ago
1
Feature#271

#357 YuanTian1991 closed 3 years ago
1
Redesign actionbar

#356 YuanTian1991 closed 3 years ago
1
Use decorator, user can delete/enable itself

#355 alanwilter closed 3 years ago
2
Remove pLI from dev db

#354 alanwilter closed 3 years ago
1
Delete user #352

#353 alanwilter closed 3 years ago
2
Seems there is no way to delete created users.

#352 YuanTian1991 closed 3 years ago
8
Email system to notify users that their data is ready to be viewed

#351 pontikos opened 3 years ago
0
Frontend dashboard will be implemented to track pipeline progress

#350 pontikos opened 3 years ago
0
Pipeline will be connected to the web interface so it can be launched and stopped

#349 pontikos opened 3 years ago
0
Implementation of Phenopacket standard to allow for exchange of phenotyping information

#348 pontikos opened 3 years ago
0
Import VCF files from PGP-UK

#347 pontikos opened 3 years ago
0
Fix HPO to return 404 for non existent entries

#346 alanwilter closed 3 years ago
1
Fix #175

#345 YuanTian1991 closed 3 years ago
1
A fix for 328 and 318 in the old schema

#344 alanwilter closed 3 years ago
1