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phyloref
/
phylo2owl
Tool to convert phylogenies to OWL ontologies
MIT License
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2
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Bump jena-core from 3.1.1 to 4.2.0 in /tests/shacl
#30
dependabot[bot]
opened
2 years ago
0
Phyloreferences that can be interpreted as either node-based or branch-based
#29
gaurav
closed
6 years ago
3
Node-based definition for more than two nodes
#28
gaurav
opened
6 years ago
0
Adds purpose and overview to the front material
#27
hlapp
closed
7 years ago
0
Writing portable node-based definitions
#26
gaurav
opened
7 years ago
3
phyloref:excludes_lineage_to cannot function without a sibling clade
#25
gaurav
closed
7 years ago
5
Added Pylint and code cleanup
#24
gaurav
closed
5 years ago
4
Crowl et al. experiment
#23
gaurav
closed
7 years ago
1
Replace reasoner.jar with Robot
#22
gaurav
opened
7 years ago
0
Improve phyloreference representation
#21
gaurav
closed
7 years ago
1
Should we explicitly identify terminal nodes in the OWL output?
#20
gaurav
opened
7 years ago
2
Extend test suite to test all available files
#19
gaurav
closed
7 years ago
3
Add support for duplicate taxon labels
#18
gaurav
opened
7 years ago
1
Integrate HermiT reasoner
#17
gaurav
closed
7 years ago
4
Additional SHACL tests and tests for the SHACL tests themselves
#16
gaurav
closed
7 years ago
1
Added support for different input types, added tests.
#15
gaurav
closed
7 years ago
1
testShacl.jar should be compiled on Travis
#14
gaurav
opened
7 years ago
1
SHACL testing
#13
gaurav
closed
7 years ago
5
Add tests for non-tree phylogenetic networks
#12
gaurav
opened
7 years ago
1
Add support for Nexus and NeXML
#11
gaurav
closed
7 years ago
1
Validating the OWL representation
#10
gaurav
opened
7 years ago
1
First working version of phylo2owl.py
#9
gaurav
closed
7 years ago
0
Updated .gitignore to Github's default python .gitignore
#8
gaurav
closed
7 years ago
0
Added license, closes #1.
#7
gaurav
closed
7 years ago
0
Initial "release" -- basic Python script and test suite
#6
gaurav
closed
7 years ago
1
Adds Travis CI status badge
#5
hlapp
closed
7 years ago
0
Enable Travis CI
#4
hlapp
closed
7 years ago
0
Enable automatic integration testing
#3
hlapp
closed
7 years ago
0
Initial "release" -- basic Python script and test suite
#2
gaurav
closed
7 years ago
1
Which license to use?
#1
gaurav
closed
7 years ago
1