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pnlbwh
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pnlNipype
PNL pipeline for NIFTI images
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Upgrade WMA to py3, omit PY2BIN variable concept
#70
tashrifbillah
closed
3 years ago
2
filter bval<=bhigh before tractography
#69
tashrifbillah
closed
3 years ago
1
[ENH] Accept space separated params
#68
tashrifbillah
closed
3 years ago
1
maskfilter--> nifti_maskfilter, otherwise clashes with mrtrix/maskfilter
#67
tashrifbillah
closed
3 years ago
0
align.py should not rotate bvecs
#66
tashrifbillah
closed
3 years ago
1
Small typo with documentation
#65
sbouix
closed
3 years ago
3
unring.py error
#64
eknyazhe
closed
4 years ago
1
[Solution] BRAINSTools installation failure
#63
tashrifbillah
opened
4 years ago
0
correct dag.png location
#62
tashrifbillah
closed
4 years ago
0
Script integrate
#61
tashrifbillah
closed
4 years ago
0
mkdir() permission
#60
tashrifbillah
closed
4 years ago
1
Topup mask
#59
tashrifbillah
closed
4 years ago
0
apply_topup on primaryMask and secondaryMask
#58
tashrifbillah
closed
4 years ago
4
Differential outlier replacement
#57
tashrifbillah
closed
4 years ago
0
fs.py
#56
tashrifbillah
closed
4 years ago
1
Broken link for mktrainingfiles.sh
#55
eknyazhe
closed
4 years ago
1
[update required] nib.load.get_fdata()
#54
tashrifbillah
opened
4 years ago
1
use relative href for all images
#53
tashrifbillah
closed
4 years ago
2
Tutorial for PNL
#52
tashrifbillah
closed
4 years ago
2
Free-water analysis
#51
arched1
closed
4 years ago
5
[ENH] -hippocampal-subfields can be used with -autorecon3
#50
tashrifbillah
closed
4 years ago
1
pass --bvals to bse.py script
#49
tashrifbillah
closed
4 years ago
4
fsl_eddy fails to write to cli.NonexistentPath
#48
tashrifbillah
closed
4 years ago
4
luigi-pnlpipe introduced changes in scripts
#47
tashrifbillah
closed
4 years ago
1
Final mask from `pnlNipype/exec/fsl_topup_epi_eddy`
#46
njhunsak
closed
4 years ago
7
Need access to nhdr program
#45
njhunsak
closed
4 years ago
6
fsl_topup_epi_eddy local variable 'bvals2' referenced before assignment
#44
njhunsak
closed
4 years ago
2
No files generated with fs2dwi
#43
njhunsak
closed
4 years ago
12
Revise standalone installation instruction
#42
tashrifbillah
closed
4 years ago
3
cannot import name 'UKFTractography' from 'plumbum.cmd'
#41
njhunsak
closed
4 years ago
2
Correct way for obtaining epimask
#40
tashrifbillah
closed
4 years ago
2
Watch fsl_eddy.py and fsl_topup_eddy_epi.py scripts for errors
#39
tashrifbillah
closed
4 years ago
3
Enable hires with fs.py, redesign how eddy_config.txt is passed
#38
tashrifbillah
closed
5 years ago
1
Simplify mabs
#37
tashrifbillah
closed
5 years ago
0
nifti_fs hires flag
#36
sbouix
closed
5 years ago
2
pnl_epi output
#35
eknyazhe
closed
5 years ago
1
apply correct warp to dwimask, remove documentation softlinks
#34
tashrifbillah
closed
5 years ago
0
clarify wmqlqc usage
#33
tashrifbillah
closed
5 years ago
0
wmqlqc .vtp
#32
eknyazhe
closed
5 years ago
1
docker image with neurodocker
#31
kaczmarj
closed
4 years ago
4
omit -e 0
#30
tashrifbillah
closed
5 years ago
0
warp epi mask, include wmqlqc.py
#29
tashrifbillah
closed
5 years ago
0
Copy bval/bvec after epi correction
#28
tashrifbillah
closed
5 years ago
1
Warp epi mask
#27
tashrifbillah
closed
5 years ago
1
Help messages for fs2dwi
#26
monicalyons
closed
5 years ago
1
cp pnlpipe/pnlscripts/wmqlqc.py into pnlNipype/scripts
#25
tashrifbillah
closed
5 years ago
1
submodule cmd update, clone with --recurse-submodules
#24
tashrifbillah
closed
5 years ago
0
nifti_bse
#23
eknyazhe
closed
5 years ago
1
Typo in FSL eddy usage
#22
monicalyons
closed
5 years ago
1
Submodule based pnlpipe_software integration
#21
tashrifbillah
closed
5 years ago
1
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