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poseidon-framework
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poseidon-hs
A toolset to work with modular genotype databases in the Poseidon format
https://poseidon-framework.github.io/#/trident
MIT License
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beef-up trident serve to provide meaningful "URI"-like responses for Poseidon_IDs and packages
#323
stschiff
opened
5 days ago
1
Fix `parseInGenoSep`
#322
nevrome
closed
5 days ago
1
trident init issue
#321
guevara2024
opened
1 week ago
1
Bibliography API and listing functionality
#320
stschiff
opened
1 week ago
2
Bump codecov/codecov-action from 4 to 5
#319
dependabot[bot]
closed
1 week ago
0
support for gzipped-writing
#318
stschiff
opened
3 weeks ago
10
`-p` should allow to select VCF files (both normal and zipped)
#317
nevrome
opened
3 weeks ago
2
Again allowed 0 in the Nr_SNPs .janno column
#316
nevrome
closed
3 weeks ago
4
Patch geno one extensions bug
#315
stschiff
closed
3 weeks ago
1
Bad handling of file extensions with unpackaged genotype data in trident v1.5.7.0
#314
smpeltola
closed
3 weeks ago
2
Fix .janno decoding issues
#313
nevrome
closed
3 weeks ago
2
.janno validation fails for cells with text that ends with an `à` character
#312
nevrome
closed
3 weeks ago
2
trident validate should check LF-line endings
#311
stschiff
opened
1 month ago
2
removed a lot of unused (?) ToJSON and FromJSON instances
#310
nevrome
closed
1 month ago
3
Remove HasColName
#309
stschiff
closed
1 month ago
2
Vcf support
#308
stschiff
closed
1 month ago
5
Improve .janno parsing
#307
nevrome
closed
1 month ago
7
Improve the error messages in case of .janno parsing failure
#306
nevrome
closed
1 month ago
5
Gzip reading-support
#305
stschiff
closed
2 months ago
13
`--preservePyml`
#304
nevrome
closed
4 months ago
3
Add support for PACKEDANCESTRYMAP format
#303
TCLamnidis
opened
5 months ago
2
MD5 hash for .janno file different on macOS Ventura 13.6.7 (22G720)
#302
nevrome
closed
5 months ago
5
Ordered forge
#301
stschiff
closed
5 months ago
4
Arranging individuals in a poseidon package
#300
TCLamnidis
closed
4 months ago
11
Better parsing exceptions
#299
nevrome
closed
4 months ago
5
trident rectify could have an option to check and fill the `Nr_SNPs` Janno-column
#298
stschiff
opened
6 months ago
0
new option to output all janno columns in list
#297
stschiff
closed
6 months ago
3
trident v1.4.1.0 segmentation fault on mac OS
#296
joshuamschmidt
closed
6 months ago
9
Bump 8c6794b6/hpc-codecov-action from 3 to 4
#295
dependabot[bot]
closed
7 months ago
0
Bump peaceiris/actions-gh-pages from 3 to 4
#294
dependabot[bot]
closed
7 months ago
0
Retiring Josiah Carberry
#293
nevrome
closed
7 months ago
2
gh action: Haskell/actions/setup is getting deprecated
#292
stschiff
closed
8 months ago
2
Use stack for release action
#291
nevrome
closed
6 months ago
2
trident genoconvert throws warning that files it created exist
#290
TCLamnidis
closed
8 months ago
7
Option to remove contributors from a package with `trident rectify`, or automatic overwriting of Josiah Carberry when new contributors are added.
#289
TCLamnidis
closed
6 months ago
8
more adjustements for jannocoalesce
#288
nevrome
closed
9 months ago
3
Bump freckle/stack-action from 4 to 5
#287
dependabot[bot]
closed
9 months ago
0
Bump codecov/codecov-action from 3 to 4
#286
dependabot[bot]
closed
9 months ago
2
Getting more information out of trident list
#285
TCLamnidis
opened
10 months ago
3
Jannocoalesce minor adjustments
#284
nevrome
closed
10 months ago
1
More informative consistency checks
#283
nevrome
closed
9 months ago
5
Jannocoalesce
#282
stschiff
closed
9 months ago
15
Bump 8c6794b6/hpc-codecov-action from 2 to 3
#281
dependabot[bot]
closed
1 year ago
1
V 1.4.0.3: Optimization of resolveEntityIndices
#280
stschiff
closed
1 year ago
2
Problem installing trident with conda (MacOS)
#279
jbv2
closed
4 months ago
11
new feature janna-coalesce or janno-join
#278
stschiff
closed
11 months ago
5
Issues in HTTP-communication with server
#277
raveancic
closed
1 year ago
4
Breaking changes and maintaining reproducibility
#276
nevrome
opened
1 year ago
4
I turned off the ploidy check
#275
nevrome
closed
1 year ago
1
Patch ploidy error 1.4.0.1
#274
stschiff
closed
1 year ago
1
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