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poseidon-framework
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poseidon-hs
A toolset to work with modular genotype databases in the Poseidon format
https://poseidon-framework.github.io/#/trident
MIT License
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Add removing of .bib entry duplicates during forging
#261
nevrome
closed
1 year ago
1
The forge and fetch selection language should be able to specify package versions
#260
nevrome
closed
1 year ago
1
Supervalidate
#259
nevrome
closed
1 year ago
1
Multi-archive serve
#258
stschiff
closed
1 year ago
2
Add subcommand `snapshot`
#257
nevrome
opened
1 year ago
0
Add meaningful metavars to all optparse-applicative parsers
#256
nevrome
closed
1 year ago
2
reworked API field names
#255
nevrome
closed
1 year ago
3
Notes on how to serve multiple package respositories
#254
stschiff
closed
1 year ago
6
Unify list cols
#253
nevrome
closed
1 year ago
1
Split up SecondaryTypes
#252
stschiff
closed
10 months ago
2
`forge` should get an option to append an optional .janno column with source-package information
#251
nevrome
opened
1 year ago
7
Add a global option `--ignoreChecksums` to trident
#250
nevrome
closed
1 year ago
3
Make `update` more modular
#249
nevrome
closed
1 year ago
3
Validate only components of a package with `validate`
#248
nevrome
closed
1 year ago
3
Release action should build a static binary for Apple Silicon
#247
nevrome
closed
3 months ago
4
CI will fail at the end of this month
#246
nevrome
closed
1 year ago
2
Changes for Poseidon v2.7.1
#245
nevrome
closed
1 year ago
2
Shorten excessively long genotype data parsing warnings just as we do with errors
#244
nevrome
closed
3 months ago
2
Entity names should not be allowed to include () bracket openings and closings
#243
stschiff
opened
1 year ago
2
started upgrading to lts-20.17
#242
stschiff
closed
1 year ago
3
`trident chronicle` + `trident timetravel`
#241
nevrome
closed
1 year ago
11
Simplify golden tests
#240
nevrome
closed
1 year ago
1
Generic survey
#239
nevrome
closed
1 year ago
2
Bump actions/checkout from 2 to 3
#238
dependabot[bot]
closed
1 year ago
1
Allow reading genotype data in compressed archives
#237
nevrome
opened
1 year ago
1
List of code sections that should be refactored at some point
#236
nevrome
opened
1 year ago
3
Poseidon v2.7.0
#235
nevrome
closed
1 year ago
4
first draft of v2 list API
#234
stschiff
closed
1 year ago
12
Added an option to validate all SNPs
#233
nevrome
closed
1 year ago
3
Added a newtype `JannoFile` for `[JannoRow]`
#232
nevrome
closed
1 year ago
4
Minor changes
#231
nevrome
closed
1 year ago
1
Implement a way to specify the output order of individuals in `forge`
#230
nevrome
opened
1 year ago
4
Make `[JannoRow]` an instance of `Monoid`
#229
nevrome
closed
1 year ago
0
fix server-client interaction broken since 1.1.8.4
#228
nevrome
closed
1 year ago
2
Add recommendation to general error message
#227
nevrome
closed
1 year ago
3
Refactoring `list --individuals -j ...`
#226
nevrome
closed
1 year ago
3
`-j` in `list` should support arbitrary, additional columns
#225
nevrome
closed
1 year ago
0
Improve the error messages in case of a genotype data parsing failure
#224
nevrome
opened
1 year ago
4
`validate` should have an option to parse the entire .bed/.geno file, not just the first 100 SNPs
#223
nevrome
closed
1 year ago
0
Flexible pop name output
#222
stschiff
closed
1 year ago
13
Janno input validation for JSON and CSV data
#221
nevrome
closed
1 year ago
3
minor bug fixes and refactoring
#220
nevrome
closed
1 year ago
1
`poseidon-http-server` should be generated in automatic release pipeline
#219
stschiff
closed
1 year ago
3
Introducing reproducibility
#218
stschiff
closed
1 year ago
7
Fog
#217
stschiff
closed
1 year ago
0
added a proper warning if one or all baseDirs do not exist
#216
nevrome
closed
1 year ago
1
fixed --no-extract and made it capable to handle non-package entities correctly
#215
nevrome
closed
1 year ago
10
fixed --no-extract and made it capable to handle non-package entities correctly
#214
nevrome
closed
1 year ago
2
Encoding issue when writing .janno files
#213
nevrome
closed
1 year ago
1
switch from String to Text in the representation of .janno files
#212
nevrome
closed
1 year ago
3
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