rdpstaff classifier issues

rdpstaff / classifier

RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s

GNU General Public License v2.0

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issues

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Training Data Site for build.xml is Defunct

#30 Friend-of-Ollie opened 2 months ago
0
Online RDP classifier (http://rdp.cme.msu.edu/classifier/classifier.jsp.) cannot be opened

#29 jingliu92 closed 1 year ago
3
FYI: Trimming to region of interest

#28 LaraMacheriotou opened 1 year ago
0
Retraining the RDP - Problem with Sequence/Taxonomy File Format

#27 MarwahAhmadHelaly closed 2 years ago
2
addFullLineage.py and lineage2taxTrain.py

#26 LIU3379 opened 3 years ago
0
why there are a lot of s__uncultured_bacterium_qiime_unique_taxon_tag_xxxx and norank_qiime_unique_taxon_tage was found in the taxonomy classification result

#25 LuffyLuffy opened 3 years ago
0
Error while getting repo2.maven to /root/.ant/lib/ivy.jar

#24 daywin94 opened 4 years ago
1
Training the RDP classifier -c option

#23 ddavis3739 opened 5 years ago
0
Which is canonical, this github repo (v2.10.1) or sourceforge (v2.16)

#22 gnewton opened 6 years ago
0
LOOT (by taxon) analysis: calculation error on % of misclassified Seqs?

#21 dougwyu opened 6 years ago
0
custom training data error

#20 TurbulentCupcake opened 6 years ago
0
how to perform leave one out testing using a confidence of 0?

#19 TurbulentCupcake opened 7 years ago
0
How to format the taxonomy file to retrain classifier

#18 yingeddi2008 opened 7 years ago
36
Merge classification from different training set

#17 complexgenome opened 7 years ago
0
Problem isntalling classifier

#16 OrsonMM opened 7 years ago
4
Problems with make file

#15 nbetrapa closed 8 years ago
7
Continuous errors with classifier subcommands - problem in tax file?

#14 anniebtp opened 8 years ago
0
Is there a way to define a different k-mer? What way to chop up the reads?

#13 yingeddi2008 opened 8 years ago
0
How to map RDP Nomenclature to NCBI Nomenclature?

#12 homopolymer opened 8 years ago
1
copy number file -c flag

#11 complexgenome opened 8 years ago
4
redirect error messages and exceptions to STDERR, not STDOUT

#10 sjaenick opened 8 years ago
0
Classifier and CPU consumption

#9 fescudie opened 9 years ago
6
Problem with taxasim in headless mode

#8 iimog opened 9 years ago
1
merge-detail for fungal its

#7 dbrami closed 9 years ago
7
NullPointerException with crossvalidate

#6 iimog opened 9 years ago
3
Exception handling

#5 dbrami opened 9 years ago
1
Fixed bug that caused NullPointerException with custom training data

#4 iimog closed 9 years ago
1
Dereplication pipeline doesn't work

#3 GiBacci opened 10 years ago
0
Can't find "commons-io.jar"

#2 xapple closed 9 years ago
1
Doesn't build

#1 xapple closed 9 years ago
1