CI | Branch | Build Status |
---|---|---|
Travis | master |
Python client for Reactome content and analysis services API calls.
PyPI install using pip
(sudo) pip install reactome2py
from source
git clone repo
cd reactome2py
python setup.py install
Dockerfile
(sudo) docker build -t <tag-name>:latest .
(sudo) docker run -it --rm <tag-name>:latest
demo
folder holds jupyter notebooks to show use-cases
Try it on the fly with google coolab - NOTE: click on folder/file icon to find results generated via jupyter notebook.
https://www.ebi.ac.uk/training-beta/online/courses/reactome-tools-for-analysing-biological-pathways/
This video is useful in understanding how to fully use and interpret Reactome pathway browser features.
https://www.youtube.com/watch?v=-skixrvI4nU
In depth user guides are available at: https://reactome.org/userguide