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ropensci
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RNeXML
Implementing semantically rich NeXML I/O in R
https://docs.ropensci.org/RNeXML
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Second pass of manuscript rewrite for application note
#109
hlapp
closed
9 years ago
0
simmap vocabulary issues: char and stateChange
#108
hlapp
opened
9 years ago
3
Improvements to simmap vocabulary definitions.
#107
hlapp
closed
9 years ago
1
First pass of manuscript rewrite for application note
#106
hlapp
closed
9 years ago
1
Question on taxize devtools::revdep_check
#105
sckott
closed
9 years ago
2
CRAN check notes
#104
hadley
closed
9 years ago
4
DESCRIPTION should include URL and BugReports
#103
hadley
closed
9 years ago
0
supertreebase location has changed
#102
hlapp
closed
9 years ago
0
Various edits to the Intro to RNeXML section
#101
hlapp
closed
9 years ago
3
Edits to and partial rewrite of the Introduction
#100
hlapp
closed
9 years ago
1
Review edits on semantics, etc?
#99
cboettig
closed
9 years ago
1
Resolved a number of comments during conference call.
#98
hlapp
closed
9 years ago
1
add_basic_meta should take nexml as the last object, drop ..., update manuscript
#97
cboettig
closed
9 years ago
2
Archive copy of repo on Zenodo
#96
cboettig
closed
8 years ago
8
Manuscript next steps
#95
cboettig
closed
9 years ago
1
Deal with fork
#94
cboettig
closed
9 years ago
2
Advanced vignettes
#93
cboettig
closed
9 years ago
2
CDAO namespace is still the old one
#92
hlapp
closed
9 years ago
0
scotts comments/changes to ms
#91
sckott
closed
10 years ago
1
Other options for `nexml_publish()`
#90
sckott
closed
5 years ago
11
By default give back taxa as a column in character data.frame
#89
sckott
closed
10 years ago
12
Interested in adding windows builds with Appveyor?
#88
sckott
closed
9 years ago
8
add coercion methods to/from phylobase formats
#87
cboettig
closed
5 years ago
1
Automatically add value of $USER to document-level metadata (dc:creator)
#86
cboettig
closed
9 years ago
3
How about `add_taxa`?
#85
cboettig
closed
5 years ago
0
add coercion methods to/from caper's tree+data structure
#84
cboettig
closed
6 years ago
1
include discussion about phylobase?
#83
fmichonneau
closed
10 years ago
1
check consistency of formatting for `phylo` and `simmap`
#82
fmichonneau
closed
10 years ago
1
make sure to tell the reader what to expect from a command beforehand
#81
fmichonneau
closed
10 years ago
1
include discussion about XML namespaces
#80
fmichonneau
closed
10 years ago
1
write about the XML format in introduction
#79
fmichonneau
closed
9 years ago
12
a few (minor) edits/comments to manuscript
#78
fmichonneau
closed
10 years ago
2
www.nexml.org times out on many checks (validation)
#77
cboettig
closed
10 years ago
2
Manuscript title?
#76
cboettig
closed
10 years ago
4
add_meta should error if abbreviation is not defined in namespaces
#75
cboettig
opened
10 years ago
1
Add citation to Cranston et al
#74
cboettig
closed
10 years ago
1
SPARQL use case
#73
rvosa
closed
10 years ago
16
Ready to submit to CRAN??
#72
cboettig
closed
10 years ago
2
All exported functions should have an example in the documentation
#71
cboettig
closed
10 years ago
0
install_github error
#70
rvosa
closed
10 years ago
4
Travis should build the vignettes
#69
cboettig
closed
10 years ago
1
taxonomy - capturing provenance
#68
sckott
closed
5 years ago
4
taxonomy - handling alternative authority sources other than NCBI
#67
sckott
closed
5 years ago
0
taxonomy - taxize tool user interface (interactive prompts)
#66
sckott
closed
5 years ago
1
taxonomy - taxize tool error handling
#65
sckott
closed
5 years ago
1
added tests for taxize_nexml, added fxn to extract otu metadata elements
#64
sckott
closed
10 years ago
5
Install some apt packages *before* adding more apt repos.
#63
craigcitro
closed
10 years ago
0
changes to manuscript file
#62
sckott
closed
10 years ago
2
And suddenly Travis is unhappy about libgdal1-dev
#61
cboettig
closed
10 years ago
7
some additions to manuscript file
#60
sckott
closed
10 years ago
0
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