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ropensci
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rotl
Interface to Open Tree of Life API
https://docs.ropensci.org/rotl
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Inconsistent limit given for taxonomy_subtree()
#97
rossmounce
opened
7 years ago
3
Corrupted error message
#96
rossmounce
opened
7 years ago
0
fix some typos in the comments / examples
#95
patperu
closed
7 years ago
4
use `bibentry` instead of `citEntry` in inst/CITATION
#94
fmichonneau
closed
7 years ago
0
fix docs
#93
fmichonneau
closed
7 years ago
0
doc: arg tree -> tree_id
#92
josephwb
closed
7 years ago
8
fix doc tree -> tree_id
#91
josephwb
closed
7 years ago
3
get_study_subtree doesn't take tip_label as an argument
#90
bomeara
closed
7 years ago
1
Subtree not pruning correctly
#89
bomeara
closed
7 years ago
1
warn users that the output of tnrs_match_names might change through times
#88
fmichonneau
opened
7 years ago
1
update CITATION to include information about the Open Tree
#87
fmichonneau
closed
7 years ago
0
tnrs_match_names fuzzy behavior
#86
sckott
closed
7 years ago
4
Returns ellipsis rather than all tree_id
#85
bomeara
closed
8 years ago
8
update FAQ with current behavior when asking for induced_tree of taxa not included in synthetic tree
#84
fmichonneau
closed
7 years ago
1
use jsonvalidate to test object returned by API?
#83
fmichonneau
opened
8 years ago
0
add citation info
#82
fmichonneau
closed
8 years ago
0
NOTE about unstated dependencies w/ R 3.3.0
#81
dwinter
closed
8 years ago
4
Clean up/expand NEWS before release
#80
fmichonneau
closed
8 years ago
0
Should the next version released to CRAN be v3.0.0?
#79
fmichonneau
closed
8 years ago
3
Regenerate README before CRAN release
#78
fmichonneau
closed
8 years ago
2
Differentiate `nearest_taxon` from `taxon` for the taxonomic methods associated with `tol_mrca`
#77
fmichonneau
closed
8 years ago
6
upgrade to v3
#76
fmichonneau
closed
8 years ago
1
include in tests of tnrs methods taxa with no matches
#75
fmichonneau
closed
8 years ago
0
tol_induced_subtree errors with v3
#74
dwinter
closed
8 years ago
4
Bring Tree of Life endpoints up to v3
#73
dwinter
closed
8 years ago
1
.tol_node_info is duplicated
#72
fmichonneau
closed
8 years ago
1
convert study endpoint to v3
#71
fmichonneau
closed
8 years ago
1
convert tnrs endpoint to v3
#70
fmichonneau
closed
8 years ago
2
convert taxonomy endpoint to v3
#69
fmichonneau
closed
8 years ago
1
update synthetic tree endpoint to v3
#68
fmichonneau
closed
8 years ago
2
create function to get help associated with an endpoint
#67
fmichonneau
closed
8 years ago
1
bump version, update NEWS
#66
fmichonneau
closed
8 years ago
0
Revision
#65
fmichonneau
closed
8 years ago
0
feedback on opentree v3 API
#64
kcranston
closed
8 years ago
3
New CRAN release
#63
dwinter
closed
8 years ago
7
Tree data( #47)
#62
dwinter
closed
8 years ago
4
fix meta-analysis vignette
#61
fmichonneau
closed
8 years ago
1
create functions to interact with collections endpoint
#60
fmichonneau
opened
8 years ago
2
add argument `label_format` to `taxonomy_subtree()`
#59
fmichonneau
closed
8 years ago
1
add argument `include_lineage` to `taxonomy_lica()`
#58
fmichonneau
closed
8 years ago
3
provide methods to retrieve higher taxonomy
#57
fmichonneau
closed
8 years ago
0
handle better query limits (and figure out what they are)
#56
fmichonneau
closed
8 years ago
4
Meta analyses eg
#55
dwinter
closed
8 years ago
1
Convert TRUE/FALSE columns to logicals in tnrs_match_names
#54
dwinter
closed
8 years ago
3
update vignette to document OTT IDs missing form induced tree
#53
dwinter
closed
8 years ago
0
Work on #50
#52
dwinter
closed
8 years ago
4
studies_find_studies should have a column tree_ids like studies_find_trees does
#51
fmichonneau
closed
8 years ago
0
Create strip_ott_ids function
#50
fmichonneau
closed
8 years ago
0
Feedback request: new interface for studies_find_studies and studies_find_trees
#49
fmichonneau
closed
8 years ago
3
Bug or feature?
#48
fmichonneau
closed
8 years ago
0
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