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satijalab
/
azimuth
A Shiny web app for mapping datasets using Seurat v4
https://satijalab.org/azimuth
GNU General Public License v3.0
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error installing Azimuth Mac
#238
el-hodiri
opened
1 week ago
0
Error in `[[<-`: ! Cannot add more or less meta data without cell names
#237
rrllab
opened
2 weeks ago
0
Persistant warning: compareStrings no longer part of Biostrings
#236
bkohrn
opened
2 weeks ago
0
Error in @: no applicable method for `@` applied to an object of class "NULL"
#235
DaiZYlab
opened
1 month ago
0
Run FindAllMarkers on an Azimuth reference
#234
maud-p
opened
2 months ago
0
data privacy running Azimuth website App
#233
BanafshehKhaki
opened
3 months ago
0
Azimuth:::ConvertEnsembleToSymbol error, "...y$ensembl_gene_id` is a <logical>."
#232
winner0809
closed
3 months ago
0
Clarification in the PBMC reference (SeuratData vs Zenodo vs Azimuth website)
#231
batalha23
opened
3 months ago
2
Error installing Azimuth
#230
gilstel
opened
3 months ago
0
Seurat v5 not compatible with Azimuth
#229
chunjie-sam-liu
opened
3 months ago
0
Issue while running RunAzimuth function on my own reference created using Azimuthreference
#228
sadhanagaddam3
opened
3 months ago
0
Error installing Azimuth with Rtools
#227
ElisaRosatiScalchi
closed
4 months ago
2
ERROR: dependencies ‘glmGamPoi’, ‘TFBSTools’ are not available for package ‘Azimuth’
#226
GRT-coder
closed
4 months ago
0
Errors When Uploading and Running Dataset on Web Application and Locally
#225
macelik
opened
4 months ago
0
Azimuth compatibility with R version
#224
npirete
opened
5 months ago
2
Kidney reference zenodo
#223
KalinNonchev
closed
5 months ago
2
Gene ID conversions
#222
annaborchers
opened
6 months ago
0
Azimuth installation problem
#221
bebejhun
closed
5 months ago
2
`fv.size() != vector_size`
#220
zacharyrs
opened
6 months ago
0
Bug in `AzimuthReference`
#219
zacharyrs
opened
6 months ago
1
homolog.table as reference in RunAzimuth
#218
KalinNonchev
opened
6 months ago
2
RunAzimuth offline with homolog.table path reference
#217
KalinNonchev
opened
6 months ago
4
Getting error in RunAzimuth function with "bonemarrowref" reference on Seurat object
#216
JainRit
opened
6 months ago
0
object 'mtx.shape' not found ERROR Azimuth web app
#215
anastamag
closed
5 months ago
2
LoadH5ADobs Missing Labels
#214
sylvia-science
opened
6 months ago
0
Reproducibility
#213
pwmellors
closed
5 months ago
2
Error Installing Azimuth
#212
NicoHadas
closed
7 months ago
0
RunAzimuth ATAC working for BMMC but not for PBMC atlas
#211
rauldiul
opened
7 months ago
0
Azimuth and integrated data
#210
tirk999
closed
5 months ago
1
Docker image tag says "v0.5.0" but sessionInfo() inside the container returns "Azimuth_0.4.6"
#209
sinanassiri
closed
7 months ago
1
AzimuthReference fails when metadata field contains empty factor levels
#208
erzakiev
opened
8 months ago
0
AzimuthReference error: refAssay (SCT) should contain a single SCT model
#207
erzakiev
opened
8 months ago
0
Error when using the web app for PBMC annotation
#206
aaronejaime
opened
8 months ago
5
Is there a way to find out which reference genes drive the cell type prediction score?
#205
dgoekbuget
opened
8 months ago
1
ConvertEnsembleToSymbol
#204
GischD
opened
8 months ago
2
RunAzimuth not working with SCT assay
#203
anoop1988
closed
8 months ago
1
Azimuth and Signac error
#202
nitinmahajan20
closed
8 months ago
2
Azimuth UMAP result is not consistent with Seurat
#201
tewengtong
closed
8 months ago
2
Error at 'error in evaluating the argument 'x' in selecting a method for function 't': non-conformable arrays'
#200
shivUSF
opened
9 months ago
5
Error in indices.ba
#199
jcorn427
opened
9 months ago
1
Markers listed in Azimuth for human tonsil are incorrect and in conflict with original preprint?
#198
denvercal1234GitHub
opened
9 months ago
0
changing `k.weight` in RunAzimuth seems does not allow workaround error in FindWeights
#197
mkazanov
opened
9 months ago
1
Bringing log_v5 up to date
#196
Gesmira
closed
10 months ago
0
Error 'could not find function "Key<-"' when using docker
#195
qianxuans
opened
10 months ago
2
Error in eval(predvars, data, env) : object 'log_umi' not found
#194
Tycooner
opened
10 months ago
3
Compatibility between azimuth with seurat v4
#193
Montsecb
opened
10 months ago
3
Error in .local(x, na.rm, dims, ...) : object 'CRsparse_colSums' not found error from RunAzimuth()
#192
annstrange
closed
10 months ago
8
Error in installing package
#191
czfoo
opened
11 months ago
4
Missing a parenthesis in the installation code
#190
pedrodcb
opened
11 months ago
0
Release/0.5.0
#189
Gesmira
closed
11 months ago
1
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