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scidash
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neuronunit
A package for data-driven validation of neuron and ion channel models using SciUnit
http://neuronunit.scidash.org
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Enable daily Travis CI builds
#215
JustasB
closed
5 years ago
1
Easier debugging with pyNeuroML and especially NEURON
#214
rgerkin
opened
5 years ago
0
Change from hard-coded to NeuroML-derived variable names in NEURON Backend
#213
rgerkin
opened
5 years ago
0
Simpler instance less capability checks
#212
NeZanyat
closed
5 years ago
1
Unit test fix test
#211
JustasB
closed
5 years ago
1
Dev <- Dash
#210
rgerkin
closed
5 years ago
1
Dev -> Dash
#209
rgerkin
closed
5 years ago
1
Can't get values from memory_cache because hash was changed
#208
NeZanyat
closed
5 years ago
5
KeyError: 'injected_square_current'
#207
NeZanyat
closed
5 years ago
5
Solution to use NE python API for bimodality tests fails, due to NeuroElectro query syntax
#206
russelljjarvis
opened
5 years ago
3
WIP: Instance-less capabilities
#205
NeZanyat
closed
5 years ago
5
Additional morphology tests
#204
JustasB
closed
5 years ago
2
Way to check class capabilities without instantiating it
#203
NeZanyat
closed
5 years ago
5
Morphology unit tests, documentation, and pyLM install as extra
#202
JustasB
closed
5 years ago
0
broken dev build
#201
JustasB
closed
5 years ago
5
Fixes to Druckmann tests
#200
russelljjarvis
closed
5 years ago
2
Including L-Measure for morphology tests
#199
JustasB
closed
5 years ago
4
Add a README.ipynb (and companion README.md) to every subdirectory
#198
rgerkin
opened
5 years ago
2
Could not find a version that satisfies the requirement sciunit-9999 (from neuronunit==0.19)
#197
gidili
closed
5 years ago
2
sciunit.log depreciated?
#196
russelljjarvis
closed
5 years ago
1
Dev install fix
#195
rgerkin
closed
5 years ago
3
Fix requirements parser to support pip install -r requirements.txt
#194
rgerkin
closed
5 years ago
1
Use dynamic binding of methods, to make methods available, while avoiding re-classing pyNN backends as NU backends.
#193
russelljjarvis
opened
5 years ago
3
Is parallel rheobase faster than binary search rheobase
#192
russelljjarvis
closed
5 years ago
2
HDF5 build error when installing latest AIBS skd
#191
JustasB
closed
5 years ago
3
Implement all Druckman Measurements
#190
rgerkin
closed
5 years ago
35
Cache only backend
#189
gidili
opened
5 years ago
0
Fix AIBS module
#188
rgerkin
closed
5 years ago
1
Backend Caching Implementation Bug
#187
rgerkin
opened
5 years ago
1
Model validation
#186
gidili
closed
5 years ago
5
Issue 1 Upgrading pip to pip10, breaks NU installation.
#185
russelljjarvis
closed
6 years ago
6
Fix erroneous commit to scidash/neuronunit.
#184
russelljjarvis
closed
6 years ago
1
Optimization results
#183
russelljjarvis
opened
6 years ago
0
Note about broken docker build. sciunit is significantly different now.
#182
russelljjarvis
opened
6 years ago
3
Dev
#181
rgerkin
closed
6 years ago
0
Given GLIF given replaced nan's with interpolated_spike_voltages. How to deal with unrealistic Membrane potentials such that GLIF membrane potential is elligible for tests?
#180
russelljjarvis
opened
6 years ago
7
Problem with new latest sciunit dev. Cannot construct new tests suite object.
#179
russelljjarvis
closed
5 years ago
1
Dev
#178
russelljjarvis
closed
6 years ago
4
Need a list of biological neurons (neurolex ids) to optimize against.
#177
russelljjarvis
opened
6 years ago
13
Network based neuronunit tests and data to inform the construction of such tests.
#176
russelljjarvis
closed
6 years ago
3
Rather than having backends for things that are already backends, instead introduce an interfaces directory.
#175
russelljjarvis
opened
6 years ago
0
The file get_neab.py should be re-written as a function.
#174
russelljjarvis
closed
6 years ago
1
Russell
#173
russelljjarvis
closed
6 years ago
3
Surrogate pull request to facilitate offline merge.
#172
russelljjarvis
closed
6 years ago
2
Python 2 issue on test.judge
#171
gidili
opened
6 years ago
3
ISI and CV test need to override VMTests.validate_observation method.
#170
russelljjarvis
opened
6 years ago
1
Just seeking to merge the file neuronunit/tests/dynamics.py
#169
russelljjarvis
closed
6 years ago
2
Make a PyNN model class
#168
rgerkin
opened
6 years ago
3
Unit test refactor
#167
rgerkin
opened
6 years ago
0
PyNN Izhikevitch models, and NeuroML NEURON Izhikevitch models do not produce the same results with a user naive run.
#166
russelljjarvis
closed
6 years ago
1
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