shanilpanara origamiUROP issues

shanilpanara / origamiUROP

Autonomous Generation of DNA Origami Nanostructures - Summer Project

GNU General Public License v3.0

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Simulation instructions

#59 debeshmandal closed 4 years ago
0
Fiona folded

#58 debeshmandal closed 4 years ago
0
Add transform method to Nucleotide

#57 debeshmandal opened 4 years ago
0
Create TCL visualisation file for VMD

#56 debeshmandal opened 4 years ago
0
Use Documentation generator to generate documentation

#55 debeshmandal opened 4 years ago
0
Review protocols folder and sandbox folder

#54 debeshmandal opened 4 years ago
0
Update README

#53 debeshmandal opened 4 years ago
1
Fiona folded

#52 FionaSander closed 4 years ago
0
Louise dev

#51 lamr18 closed 4 years ago
4
Automate the dimensions of the `System` box

#50 shanilpanara opened 4 years ago
2
Enforcing 180 degrees turns in structures

#49 shanilpanara closed 4 years ago
1
Generating staples - different methods

#48 shanilpanara opened 4 years ago
0
Debesh lattice

#47 debeshmandal closed 4 years ago
0
DNA Snake

#46 shanilpanara closed 4 years ago
4
new strand generation

#45 debeshmandal closed 4 years ago
0
reader for oxDNA files

#44 shanilpanara closed 4 years ago
1
shanil create lattice route and output correct oxDNA format

#43 shanilpanara closed 4 years ago
1
debesh connect edges and do units

#42 debeshmandal closed 4 years ago
1
shanil lattice and crossover computation

#41 shanilpanara closed 4 years ago
1
Creating a lattice class

#40 shanilpanara closed 4 years ago
1
Create DNAEdge class and init inheritance

#39 debeshmandal closed 4 years ago
1
2D lattice in polygon

#38 debeshmandal closed 4 years ago
4
PR for reading LAMMPS dump files

#37 debeshmandal closed 4 years ago
0
Create framework to connect edges together

#36 debeshmandal closed 4 years ago
0
Create ability to specify units system

#35 debeshmandal closed 4 years ago
0
Generate a DNA Snake for different shapes

#34 shanilpanara closed 4 years ago
4
Creating a lattice class and calculating crossover locations

#33 shanilpanara closed 4 years ago
3
Create CanDo input file

#32 debeshmandal opened 4 years ago
1
Create across function for System

#31 debeshmandal closed 4 years ago
1
lammps data output

#30 debeshmandal closed 4 years ago
0
README and oxDNA output

#29 shanilpanara closed 4 years ago
1
Read LAMMPS dump files

#28 debeshmandal closed 4 years ago
0
Reader oxDNA file

#27 debeshmandal closed 4 years ago
0
LAMMPS output for oxDNA system

#26 debeshmandal closed 4 years ago
0
Debesh fiona

#25 debeshmandal closed 4 years ago
0
oxDNA setup for mrDNA simulations

#24 FionaSander closed 4 years ago
0
Debesh point in polygon

#23 debeshmandal closed 4 years ago
0
Added generate_helix and integrated into Edge Class

#22 shanilpanara closed 4 years ago
5
debesh-oxdna-edits - add_strands + docstrings

#21 debeshmandal closed 4 years ago
2
Create square lattice inside polygon

#20 debeshmandal closed 4 years ago
1
Added add_strand, testing and property setter decorator for sequence

#19 shanilpanara closed 4 years ago
1
DNA Folding framework discussion

#18 shanilpanara closed 4 years ago
3
Debesh oxdna migrate

#17 debeshmandal closed 4 years ago
2
Debesh oxdna migrate

#16 debeshmandal closed 4 years ago
2
shanil oxdna migrate

#15 debeshmandal closed 4 years ago
0
debesh oxdna migration

#14 debeshmandal closed 4 years ago
2
initialised oxdna folder and main classes

#13 debeshmandal closed 4 years ago
0
migrating oxDNA UTILS code here

#12 debeshmandal closed 4 years ago
2
Describing Edge in terms of segments

#11 debeshmandal closed 4 years ago
6
Small tweaks to polygon

#10 shanilpanara closed 4 years ago
0