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skinniderlab
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CLM
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added tensorboard logging
#244
vineetbansal
closed
1 week ago
0
Handling multiple features for the model
#243
adichaloo
closed
1 week ago
0
Incorrect version of CLM reported on pip install
#242
vineetbansal
opened
1 week ago
0
Investigate pinning of scipy
#241
vineetbansal
opened
1 week ago
0
only DataFrame input supported in write_to_csv_file
#240
vineetbansal
opened
1 week ago
4
Initial commit for Mass Conditional RNN
#239
adichaloo
opened
2 weeks ago
0
numpy.linalg.LinAlgError in calculate_outcomes
#238
skinnider
opened
3 weeks ago
0
all clm commands support --seed, set to 0 by default
#237
vineetbansal
closed
3 weeks ago
0
managing multiple snakemake runs in parallel
#236
skinnider
closed
4 weeks ago
2
fix some text in plots
#235
skinnider
closed
4 weeks ago
0
KeyError: "['input_smiles'] not found in axis"
#234
skinnider
opened
1 month ago
10
setting slurm_extra across clusters
#233
skinnider
closed
1 month ago
3
nn_tc_ever_v_never runs right away
#232
skinnider
closed
1 month ago
2
Getting paths from config whenever we can
#231
vineetbansal
closed
1 month ago
0
not hardcoding output file paths in rule
#230
vineetbansal
closed
1 month ago
0
updated default value of max_epochs
#229
vineetbansal
closed
1 month ago
0
MissingInputException
#228
skinnider
closed
1 month ago
18
config documentation
#227
skinnider
opened
1 month ago
2
max_epochs default
#226
skinnider
closed
1 month ago
1
setting seed in a fixture at the function level
#225
vineetbansal
closed
1 month ago
0
Adding compression support for add_carbon
#224
adichaloo
closed
1 month ago
0
Changes in seed to main function for add_carbon
#223
adichaloo
closed
1 month ago
1
comparing tc between test set and training set in a particular fold
#222
anushka255
closed
1 month ago
0
Adding absoulte path to files without directory
#221
adichaloo
closed
1 month ago
1
random behavior in create_training_sets
#220
vineetbansal
closed
1 month ago
1
trying pinned deps for robust CI execution
#219
vineetbansal
closed
1 month ago
0
Adding seed to the main function of the clm commands
#218
adichaloo
closed
1 month ago
1
nearest-neighbor Tc, ever vs. never generated
#217
skinnider
opened
1 month ago
0
Potential bug fixes with plots for nn_tc_ever_v_never/structural_prior_min_freq
#216
vineetbansal
closed
1 month ago
0
Box plot of tc between test-molecules and different models
#215
anushka255
closed
1 month ago
0
comparing nntc between train and test files
#214
anushka255
closed
1 month ago
0
Aa/sample all
#213
anushka255
closed
1 month ago
1
Optional review of plotting commands
#212
vineetbansal
opened
1 month ago
0
installation instructions
#211
skinnider
closed
2 months ago
1
Fixed topk_tc
#210
anushka255
closed
1 month ago
0
incorporating train dataset from individual tc_files to overall tc file
#209
anushka255
closed
1 month ago
1
Vb/docs start
#208
vineetbansal
closed
2 months ago
0
minor change to optimize tabulate molecules
#207
anushka255
closed
2 months ago
3
Updated readme
#206
anushka255
closed
2 months ago
0
updated data without changing code
#205
anushka255
closed
2 months ago
0
using csv module to parse lines in read_file
#204
vineetbansal
closed
2 months ago
0
Parsing SMILES in preprocess
#203
anushka255
closed
2 months ago
5
Plots for forecast
#202
anushka255
closed
1 month ago
3
Forecast ROC Curves
#201
vineetbansal
closed
2 months ago
0
added plots for minimum frequency
#200
anushka255
closed
1 month ago
1
an "all" bin for calculate_outcomes
#199
vineetbansal
closed
2 months ago
0
set_seed invocation
#198
vineetbansal
closed
1 month ago
0
Collapsed prep_nn_tc into write_nn_tc
#197
anushka255
closed
2 months ago
0
Update tests.yml
#196
vineetbansal
closed
2 months ago
0
collapsed prep_outcome_freq into calculate_outcomes
#195
anushka255
closed
2 months ago
0
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