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smarco
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WFA2-lib
WFA-lib: Wavefront alignment algorithm library v2
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suboptimal alignment in endsfree mode when match score != 0
#102
joyeuxnoel8
opened
1 month ago
1
cigar clarification in README
#101
rlorigro
opened
1 month ago
0
Fix C++ example in the README
#100
quim0
opened
2 months ago
0
Vectorized extend kernels integration in WFA2-lib.
#99
criniguez
opened
3 months ago
0
rust crate libwfa
#98
hangsuUNC
opened
3 months ago
11
Memory issues with WFA2 and BiWFA while processing millions of paired alignments
#97
GSbioinfo
opened
4 months ago
0
Use conditional import for omp.h
#96
rlorigro
closed
3 months ago
1
omp.h still required when invoking -DOPENMP=FALSE in CMake build
#95
rlorigro
closed
3 months ago
1
About how wavefront offsets are saved
#94
shenwei356
closed
5 months ago
5
A few questions about my application (changing attributes, ultralow endsfree, endsfree API, max_score heuristics)
#93
feldroop
opened
6 months ago
3
Minor typos in output message
#92
pjotrp
closed
7 months ago
1
Minor fixes for testing with vcflib
#91
pjotrp
closed
7 months ago
1
Remove some unused headers
#90
8051Enthusiast
closed
7 months ago
1
Use cross platform header instead of endian.h
#89
rlorigro
closed
7 months ago
0
fatal error: 'endian.h' file not found on M1 mac
#88
rlorigro
closed
7 months ago
5
Uninitialized values leads to non-deterministic alignment results
#87
ctsa
closed
7 months ago
2
wfa2 crashes on ends-free alignment with the following options and the three sequences aligned one after another
#86
iAvicenna
closed
7 months ago
3
Fix endian.h build error on MacOS
#85
mencian
closed
1 year ago
1
Uninitialized offset can lead to client segfault
#84
ctsa
closed
1 year ago
2
Add more includes to header files
#83
twrightsman
closed
1 year ago
1
Consider following semantic versioning
#82
twrightsman
closed
1 year ago
2
Right score for score-only alignment?
#81
haojingshao
closed
1 year ago
2
Feature requests: R bindings and early stopping
#80
traversc
opened
1 year ago
1
Please support big-endian architectures
#79
vpa1977
closed
1 year ago
3
Generate Dataset Tool outdated README
#78
ghost
closed
1 year ago
1
Fix uninitialized memory issues in valgrind
#77
ctsa
closed
1 year ago
1
Valgrind uninitialized value errors
#76
ctsa
closed
1 year ago
6
Make text and pattern const strings
#75
RagnarGrootKoerkamp
closed
1 year ago
5
Allow zero gap open cost in affine2p
#74
ctsa
closed
1 year ago
2
Possible bug in ends-free score calculation when match < 0
#73
ctsa
closed
1 year ago
3
Update cigar_print_pretty
#72
kcleal
closed
1 year ago
0
Update BiWFA citation
#71
AndreaGuarracino
closed
1 year ago
0
Newer `gcc`s happy
#70
AndreaGuarracino
closed
1 year ago
1
tbrekalo: fixing typos in README.md
#69
tbrekalo
closed
1 year ago
1
fix build with OpenMP: Cmake linking syntax
#68
pettyalex
closed
1 year ago
0
Broken build with OMP enabled
#67
pettyalex
closed
1 year ago
1
Error: `uint64_t` does not name a type
#66
RagnarGrootKoerkamp
closed
1 year ago
1
Memory usage for ultra long read alignment
#65
Daniel-Liu-c0deb0t
closed
1 year ago
6
Support OpenMP when it needs flags other than C_FLAGS
#64
adamnovak
closed
1 year ago
0
Rename VERSION file to avoid <version> standard header
#63
adamnovak
closed
1 year ago
0
VERSION file breaks vcflib build on Mac
#62
adamnovak
closed
1 year ago
1
WFA2-lib for local alignment
#61
aa25desh
opened
1 year ago
1
Safe to change parameters between uses of aligner object?
#60
brendanf
closed
1 year ago
1
Which CIGAR is returned when multiple alignments have equal scores?
#59
brendanf
closed
1 year ago
3
C++ binding: allow pattern and text as std::string to be const
#58
brendanf
closed
1 year ago
1
docs: fix doc command
#57
tshauck
closed
1 year ago
1
Diffuculty building correctly
#56
iAvicenna
closed
1 year ago
8
Accelerate the extend operator using AVX2 intrinsics
#55
quim0
closed
1 year ago
3
wfa2cpp_static should link against wfa2_static
#54
marcelm
closed
1 year ago
1
Problem getting rust bindings to build
#53
wdecoster
closed
1 year ago
4
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