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smart-on-fhir
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chart-review
Measure agreement between chart reviewers.
https://docs.smarthealthit.org/cumulus/chart-review/
Apache License 2.0
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docs: prevent double-hyphens from being converted to a dash
#49
mikix
closed
1 week ago
0
feat: add new `frequencies` command to show term frequencies
#48
mikix
closed
1 week ago
0
feat: add `mentions` command to show text for each label
#47
mikix
closed
1 week ago
0
fix: give better explanations for invalid project folders
#46
mikix
closed
1 week ago
0
feat: add --csv flag to all existing commands
#45
mikix
closed
1 week ago
0
feat!: reorganize CLI commands
#44
mikix
closed
1 week ago
0
feat: add --version
#43
mikix
closed
2 weeks ago
0
WIP: show Label Studio mention details
#42
mikix
opened
2 weeks ago
0
feat(accuracy): add --verbose to print table of per-chart results
#41
mikix
closed
3 weeks ago
0
verbose output option
#40
comorbidity
closed
3 weeks ago
1
Consider adding a way to export Label Studio labels
#39
mikix
closed
1 week ago
3
feat(info): add --labels flag to print label statistics
#38
mikix
closed
3 weeks ago
1
feat(info): add --ids command to print ID mappings
#37
mikix
closed
3 weeks ago
2
Making `labelstudio-export.json` filename configurable
#36
Dtphelan1
opened
4 weeks ago
4
feat: add chart range output to `accuracy`
#35
mikix
closed
4 weeks ago
0
feat: add `info` subcommand to show computed ranges & labels
#34
mikix
closed
4 weeks ago
0
Output number of charts per reviewer
#33
comorbidity
closed
4 weeks ago
0
docs: mention Cohen's Kappa in the front page docs
#32
mikix
closed
1 month ago
0
Docs does not mention Kappa agreement scores
#31
comorbidity
closed
1 month ago
0
Documentation improvements for chart review workflow
#30
comorbidity
opened
1 month ago
3
Change "κ" to "Kappa" and bump version to 1.1.0
#29
mikix
closed
2 months ago
0
feat: add Cohen's Kappa scores to 'accuracy' output
#28
mikix
closed
2 months ago
0
Implement Cohen's Kappa for "agreement" between two reviewers
#27
comorbidity
closed
2 months ago
1
Add some info/debug commands
#26
mikix
closed
3 weeks ago
2
Update docs upon release
#25
mikix
closed
3 months ago
0
New Feature: Aggreagate multiple annotators into a set of ground-truth annotations
#24
Dtphelan1
opened
3 months ago
1
workaround exists : QA check: fail fast or warn if supplied "label" is not recognized
#23
comorbidity
opened
5 months ago
0
New Feature: annotations for results per chart as CSV/SQL
#22
comorbidity
opened
5 months ago
2
Add pypi hook and bump version to 1.0.0
#21
mikix
closed
5 months ago
0
docs: add initial user docs
#20
mikix
closed
5 months ago
0
feat!(accuracy): print results by default
#19
mikix
closed
5 months ago
0
feat: add new config option 'grouped-labels' to combine labels
#18
mikix
closed
5 months ago
1
feat: support secondary config files with --config
#17
mikix
closed
5 months ago
0
chore: delete study-specific folders, they shouldn't live in main
#16
mikix
closed
5 months ago
0
New Feature: exclude chart IDS where specified label is present
#15
comorbidity
opened
6 months ago
1
New Feature: ignore labels
#14
comorbidity
closed
5 months ago
4
New Feature: Rewrite Labels as "Binary Label"
#13
comorbidity
closed
5 months ago
3
feat: add new implied-labels config field
#12
mikix
closed
5 months ago
0
feat: add new config key 'ignore' for notes to skip
#11
mikix
closed
6 months ago
1
New Feature: LABEL PRIORITY: allow for custom rules for scoring the chart review
#10
comorbidity
closed
5 months ago
5
feat: support reading encounter-level external labels
#9
mikix
closed
6 months ago
0
feat: add support for py3.9
#8
mikix
closed
6 months ago
0
Investigate using a library to provide some matrix types / logic
#7
mikix
opened
7 months ago
0
feat: auto-detect note ranges if not specified
#6
mikix
closed
7 months ago
1
Various cleanups
#5
mikix
closed
7 months ago
2
feat!: switch accuracy command to be two-way not three-way
#4
mikix
closed
8 months ago
0
feat: add ability to fold in external annotations
#3
mikix
closed
8 months ago
1
Add a CLI, add some light unit testing, and change config from Python to Yaml/Json
#2
mikix
closed
8 months ago
0
Initial robustification thoughts
#1
mikix
closed
8 months ago
1