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smgogarten
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GWASTools
Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis
https://bioconductor.org/packages/GWASTools
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how to get start and end position of the locus
#18
ElicSY
closed
2 weeks ago
1
Update snpIDs in output of assocRegression to reflect the rsIDs
#17
niyati1211
closed
5 months ago
1
Can not use GdsGenotypeReader to read a gds file
#16
wangshuang2024
closed
8 months ago
1
createDataFile returns empty diag.geno.file
#15
ryshi06
closed
11 months ago
6
Convert Affymetrix.Rnw to Affymetrix.Rmd
#14
sonali8434
closed
1 year ago
3
Request to Replace Sweave Vignettes with R Markdown
#13
sonali8434
opened
1 year ago
5
GdsGenotypeReader error
#12
EDISON2022W
closed
1 year ago
0
Get CHR & SNP POS using rs ids
#11
Mahantesh-Biradar
closed
2 years ago
1
GdsGenotypeReader for >22 autosomal chromosomes
#10
KSkyeD
closed
3 years ago
0
Get NAs for Est, SE, Wald.stat and Wald.pval
#9
ryshi06
closed
11 months ago
1
Firth penalized likelihood function in assocCoxPH
#8
ryshi06
opened
3 years ago
2
Allow fork
#7
smgogarten
closed
4 years ago
0
Using 'Cluster()' option of CoxPH in AssocCoxPH
#6
Soo-Heon
closed
4 years ago
2
use allow.fork in openfn.gds
#5
smgogarten
closed
4 years ago
1
not able to generate scan annotation for snp matrix object
#4
treebreeder
closed
4 years ago
2
Enabling parallel processing and faster processing of intensity files
#3
DanielEWeeks
closed
4 years ago
1
Vcf check feature
#2
sarahcn
closed
6 years ago
0
Mendel err bugfix
#1
sarahcn
closed
6 years ago
0