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snayfach
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UHGV
Unified Human Gut Virome Catalog
https://portal.nersc.gov/UHGV
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Protocol for phylogenomics
#22
snayfach
closed
1 year ago
1
Protocol for genome visualization
#21
snayfach
closed
1 year ago
0
Create short/extended versions of metadata
#20
snayfach
closed
1 year ago
0
Create phylogeny using marker genes or ViPTree
#19
snayfach
closed
1 year ago
0
Read mapping statistics
#18
snayfach
closed
1 year ago
3
Functional annotations GFF file
#16
snayfach
closed
1 year ago
0
Operational viral taxonomy
#15
snayfach
closed
1 year ago
1
Get read mapping data from Bryan
#14
snayfach
closed
1 year ago
0
Update https URL
#13
snayfach
closed
1 year ago
0
Host prediction
#12
snayfach
closed
1 year ago
1
Compare new datasets to UHGV (main figure)
#11
snayfach
closed
1 year ago
1
Sipho/Podo/Myo-like
#10
snayfach
closed
1 year ago
0
Distance to reference databases
#9
snayfach
closed
1 year ago
0
Label if host prediction methods agree or not
#8
snayfach
closed
1 year ago
0
Inconsistency contig_id and genome_id
#7
snayfach
closed
1 year ago
0
Additional contig labeld
#6
snayfach
closed
1 year ago
1
Taxonomy
#5
snayfach
closed
1 year ago
0
Data resource
#4
snayfach
closed
1 year ago
0
MySQL database
#3
snayfach
closed
1 year ago
0
2x check terminal repeats
#2
snayfach
closed
1 year ago
0
2x check Benler quality assignments
#1
snayfach
closed
1 year ago
0
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