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snugel
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cas-offinder
An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.
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When will v3 be officially out?
#63
hukai916
opened
1 day ago
2
Runs based on the Kunpeng CPU. /cas-offinder error clGetPlatformIDs Failed: -1001
#62
yejianbang
opened
3 weeks ago
0
parameter setting
#61
LiangShaw
opened
10 months ago
0
Wrong number of predicted mismatches
#60
DaniPaulo
opened
1 year ago
0
Diffrenet results via webserver vs commnad line exe and error input length
#59
AlonLuboshitz
opened
1 year ago
0
Diffrenet results via webserver vs commnad line exe
#58
AlonLuboshitz
closed
1 year ago
0
"skipping non acceptable file" issue
#57
kawidney1
opened
1 year ago
0
Time to process
#56
tanyasarkjain
opened
1 year ago
0
Issue with running command
#55
tanyasarkjain
closed
1 year ago
2
Some erroneous output alongwith correct results
#54
GurpreethgnisBayer
opened
1 year ago
1
statistics?
#53
xiaonalu
opened
1 year ago
5
multicore issue
#52
udiland
closed
1 year ago
1
readme
#50
kennyworkman
closed
2 years ago
2
fix offset bug
#49
kennyworkman
closed
2 years ago
2
Rewrite
#48
benblack769
closed
2 years ago
9
Rewrite
#47
benblack769
closed
2 years ago
8
Input files - Positions issues
#46
cdiaz45
opened
2 years ago
1
Failure on Mac OSX Catalina
#45
laruellef
closed
2 years ago
1
Failing to parse input file
#44
seanExcisionBio
closed
2 years ago
3
Missing potential off-targets of length less than 23 with gaps?
#43
ofiryaish
closed
3 years ago
1
Add summary table to README
#42
pjb7687
opened
3 years ago
2
Mark bulge gap with `_` to avoid colliding with strand/direction `-`
#41
richardkmichael
closed
3 years ago
2
README.md clean-ups
#40
richardkmichael
closed
3 years ago
0
Add summary table?
#39
pjb7687
closed
3 years ago
1
Adjust CMakeLists.txt to use cmake targets with module imports
#38
richardkmichael
closed
3 years ago
7
Cleanup and organization
#37
richardkmichael
closed
3 years ago
7
cmake-related build updates
#36
richardkmichael
closed
3 years ago
1
Cannot compile 3.0.0.b (develop branch) on macOS 10.14.6
#35
richardkmichael
closed
3 years ago
12
The off-target zero-based position doesn't match the UCSC zero-based position
#34
anitagh
closed
3 years ago
1
Fix usage and mention 2bit support
#33
richardkmichael
closed
3 years ago
0
Add the publication to README
#32
richardkmichael
closed
3 years ago
0
Randomly occurring error with clFinish
#31
sowmyaiyer
closed
4 years ago
2
Simple sanity check to avoid segfault on array out-of-bounds access
#30
richardkmichael
closed
3 years ago
0
Explicitly mention 0-based vs 1-based position to help newcomers
#29
richardkmichael
closed
4 years ago
0
Tagging of input sequences
#28
selten
closed
3 years ago
2
Follow FASTA file symlinks
#27
richardkmichael
closed
4 years ago
0
conda-installed cas-offinder doesn't find GPU
#26
JoeEmendo
closed
4 years ago
2
please tag updates
#25
fizwit
closed
3 years ago
4
Simple cleanups
#24
richardkmichael
closed
3 years ago
2
Allow use of the OpenCL 1.2 API without deprecation warning
#23
richardkmichael
closed
4 years ago
0
Allow stdin for input
#22
richardkmichael
closed
4 years ago
0
Position seems off-by-1
#21
richardkmichael
closed
4 years ago
2
Improve documentation.
#20
richardkmichael
closed
5 years ago
0
Fix GFM table; typos; whitespace
#19
richardkmichael
closed
5 years ago
4
Missing off-targets
#18
joegeorgeson
closed
5 years ago
1
PAM site for Cpf1
#17
selten
closed
5 years ago
1
cas-offinder-bulge targe sequence change
#16
Viscacha22
closed
5 years ago
1
[Cas-Offinder-Bulge] IOError: [Errno 2] No such file or directory line 103
#15
jakeb1996
closed
6 years ago
1
clFinish Failed: -36 -- error message during chunk loading
#14
james0032
closed
6 years ago
1
cas-offinder-bulge
#13
lucapinello
closed
6 years ago
3
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