snugel cas-offinder issues

snugel / cas-offinder

An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.

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issues

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Less result in the output file comparing to number of found target

#65 yc508 opened 1 month ago
0
off-target position

#64 chuddy-ibk opened 1 month ago
0
When will v3 be officially out?

#63 hukai916 opened 1 month ago
4
Runs based on the Kunpeng CPU. /cas-offinder error clGetPlatformIDs Failed: -1001

#62 yejianbang opened 2 months ago
0
parameter setting

#61 LiangShaw opened 1 year ago
0
Wrong number of predicted mismatches

#60 DaniPaulo opened 1 year ago
1
Diffrenet results via webserver vs commnad line exe and error input length

#59 AlonLuboshitz opened 1 year ago
0
Diffrenet results via webserver vs commnad line exe

#58 AlonLuboshitz closed 1 year ago
0
"skipping non acceptable file" issue

#57 kawidney1 opened 1 year ago
0
Time to process

#56 tanyasarkjain opened 1 year ago
0
Issue with running command

#55 tanyasarkjain closed 1 year ago
2
Some erroneous output alongwith correct results

#54 GurpreethgnisBayer opened 1 year ago
1
statistics?

#53 xiaonalu opened 1 year ago
5
multicore issue

#52 udiland closed 1 year ago
1
readme

#50 kennyworkman closed 2 years ago
2
fix offset bug

#49 kennyworkman closed 2 years ago
2
Rewrite

#48 benblack769 closed 2 years ago
9
Rewrite

#47 benblack769 closed 2 years ago
8
Input files - Positions issues

#46 cdiaz45 opened 2 years ago
1
Failure on Mac OSX Catalina

#45 laruellef closed 2 years ago
1
Failing to parse input file

#44 seanExcisionBio closed 2 years ago
3
Missing potential off-targets of length less than 23 with gaps?

#43 ofiryaish closed 3 years ago
1
Add summary table to README

#42 pjb7687 opened 3 years ago
2
Mark bulge gap with `_` to avoid colliding with strand/direction `-`

#41 richardkmichael closed 3 years ago
2
README.md clean-ups

#40 richardkmichael closed 3 years ago
0
Add summary table?

#39 pjb7687 closed 3 years ago
1
Adjust CMakeLists.txt to use cmake targets with module imports

#38 richardkmichael closed 3 years ago
7
Cleanup and organization

#37 richardkmichael closed 3 years ago
7
cmake-related build updates

#36 richardkmichael closed 3 years ago
1
Cannot compile 3.0.0.b (develop branch) on macOS 10.14.6

#35 richardkmichael closed 3 years ago
12
The off-target zero-based position doesn't match the UCSC zero-based position

#34 anitagh closed 3 years ago
1
Fix usage and mention 2bit support

#33 richardkmichael closed 3 years ago
0
Add the publication to README

#32 richardkmichael closed 3 years ago
0
Randomly occurring error with clFinish

#31 sowmyaiyer closed 4 years ago
2
Simple sanity check to avoid segfault on array out-of-bounds access

#30 richardkmichael closed 3 years ago
0
Explicitly mention 0-based vs 1-based position to help newcomers

#29 richardkmichael closed 5 years ago
0
Tagging of input sequences

#28 selten closed 3 years ago
2
Follow FASTA file symlinks

#27 richardkmichael closed 5 years ago
0
conda-installed cas-offinder doesn't find GPU

#26 JoeEmendo closed 5 years ago
2
please tag updates

#25 fizwit closed 3 years ago
4
Simple cleanups

#24 richardkmichael closed 3 years ago
2
Allow use of the OpenCL 1.2 API without deprecation warning

#23 richardkmichael closed 5 years ago
0
Allow stdin for input

#22 richardkmichael closed 5 years ago
0
Position seems off-by-1

#21 richardkmichael closed 5 years ago
2
Improve documentation.

#20 richardkmichael closed 5 years ago
0
Fix GFM table; typos; whitespace

#19 richardkmichael closed 5 years ago
4
Missing off-targets

#18 joegeorgeson closed 5 years ago
1
PAM site for Cpf1

#17 selten closed 5 years ago
1
cas-offinder-bulge targe sequence change

#16 Viscacha22 closed 5 years ago
1
[Cas-Offinder-Bulge] IOError: [Errno 2] No such file or directory line 103

#15 jakeb1996 closed 6 years ago
1