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steineggerlab
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conterminator
Detection of incorrectly labeled sequences across kingdoms
GNU General Public License v3.0
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List of accession numbers for contamination in UniProt
#25
fmaumusINRA
opened
5 months ago
0
Segmentation fault (core dumped). Error: crosstaxonfilterorf step died
#24
keishaboateng97
opened
7 months ago
0
Conterminating the output of DIAMOND deepclust
#23
LotharukpongJS
opened
11 months ago
0
The result of "$taxidmapping" is: BL_ORD_ID:0 0 and etc.
#22
maruiqi0710
opened
11 months ago
0
Extractframes died (segmentation fault)
#21
stas-malavin
opened
1 year ago
0
Some configurations of taxons in --kingdoms don't work
#20
HeloiseMuller
opened
1 year ago
0
GTDB
#19
andrewjmc
opened
2 years ago
1
Error occurred when building mmseq on Mac
#18
ywe-1
opened
3 years ago
1
conterminator frozen at stage rescorediagonal
#17
tougai
opened
3 years ago
8
how to reports contamination with the target sequence is longer than 20kb
#16
lindechun
opened
3 years ago
1
Comparison across phylum, order, class and etc.
#15
jiapengatviome
closed
3 years ago
0
Removing sequences based on conterminator output
#14
chassenr
closed
3 years ago
2
corrected contig length in {RESULT_PREFIX}_conterm_prediction file
#13
casolp
opened
3 years ago
0
Error: Extractframes died
#12
chassenr
closed
3 years ago
6
fail to predict inserted contamination
#11
felipevzps
opened
4 years ago
5
Error: kmermatcher step died
#10
gbdias
opened
4 years ago
1
Error: integer expression expected
#9
felipevzps
closed
4 years ago
1
Error: crosstaxonfilterorf step died
#8
vtrinca
closed
4 years ago
11
Add support to provide custom NCBI taxonomy file to the protein command
#7
apcamargo
closed
4 years ago
1
Invalid pointer during calculation of alignments
#6
apcamargo
opened
4 years ago
1
Conterminator stopped after downloading taxdump.tar.gz
#5
martin-steinegger
closed
3 years ago
10
Input format
#4
ghost
closed
4 years ago
5
Use newer sse2neon?
#3
jserv
closed
4 years ago
5
List of accession numbers for contamination in NR
#2
pmenzel
opened
4 years ago
10
Link to poster
#1
pvanheus
opened
4 years ago
0