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stemangiola
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tidyseurat
Seurat meets tidyverse. The best of both worlds.
https://stemangiola.github.io/tidyseurat/
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Use rlang instead of ellipsis for dot checking
#86
olivroy
closed
4 weeks ago
1
Hotfix seurat5 one cell bug
#85
stemangiola
closed
1 month ago
0
Slice can't be called on Seurat object directly
#84
RoganGrant
closed
5 months ago
4
Add SingleR to Bioc
#83
olivroy
closed
7 months ago
1
Add website to DESCRIPTION + update config.
#82
olivroy
closed
7 months ago
1
tidyseurat::aggregate_cells doesn't pull all meta.data columns of Seurat object?
#81
denvercal1234GitHub
opened
7 months ago
4
`group_split`
#80
B0ydT
closed
8 months ago
3
changed github action
#79
stemangiola
closed
9 months ago
0
Error: 'ggplot' is not an exported object from 'namespace:tidyseurat'
#78
denvercal1234GitHub
closed
9 months ago
2
Adapt to seurat5
#77
stemangiola
closed
9 months ago
0
use DietSeurat instead of manual subsetting
#76
stemangiola
closed
9 months ago
0
aggregate_cells bug
#75
aodainic7
closed
10 months ago
0
Prepare for upcoming Seurat v5 Release
#74
Gesmira
opened
10 months ago
1
Update github actions
#73
noriakis
closed
11 months ago
0
Update `slice_sample` in `dplyr_methods.R`
#72
noriakis
closed
11 months ago
4
Documentation revision
#71
noriakis
closed
12 months ago
4
Fix conflict with ttservice
#70
stemangiola
closed
12 months ago
0
Allow to select a slot (e.g. scaled, raw etc..) in join_features()
#69
noriakis
closed
1 year ago
2
Add slice_ functions
#68
wvictor14
closed
1 year ago
8
Increase unit test coverage
#67
william-hutchison
closed
1 year ago
6
Improve the documentation of tidytranscriptomics adapters, `tidySE`, `tidySCE`, `tidySPE`, `tidyseurat`
#66
stemangiola
closed
11 months ago
18
Implement group_by and with_groups for tidyseurat
#65
stemangiola
opened
1 year ago
0
join_feature, allow to select a slot (e.g. scaled, raw etc..)
#64
stemangiola
closed
1 year ago
12
drop exports to generics
#63
stemangiola
closed
11 months ago
1
Drop bind generics
#62
stemangiola
closed
1 year ago
0
Aggregate cells
#61
stemangiola
closed
1 year ago
0
Nest speedup
#60
stemangiola
closed
1 year ago
0
Error when attempting to merge Seurat Objects after filtering
#59
william-hutchison
opened
1 year ago
4
sample_frac function changes the cell order
#58
aodainic7
opened
1 year ago
2
use all_of
#57
stemangiola
opened
1 year ago
0
drop the .drop argument
#56
stemangiola
opened
1 year ago
0
add method
#55
stemangiola
closed
1 year ago
0
add method
#54
stemangiola
closed
1 year ago
0
Renaming genes
#53
alwhiteh
closed
1 year ago
1
fix generics
#52
stemangiola
closed
1 year ago
0
documentation with real data, ie SRS/SRA number
#51
alperyilmaz
closed
2 years ago
2
fixed print
#50
stemangiola
closed
2 years ago
0
Change `pivot_longer()` argument defaults from `list()` to `NULL`
#49
DavisVaughan
closed
2 years ago
0
Add build_args --no-manual
#48
mblue9
closed
2 years ago
3
add biocasia workshop
#47
stemangiola
closed
2 years ago
0
Dev
#46
stemangiola
closed
2 years ago
0
bring add_count to service package
#45
stemangiola
opened
2 years ago
0
Will you continue supporting future versions of Seurat?
#44
chansigit
closed
2 years ago
2
Update README.md
#43
stemangiola
closed
2 years ago
0
Change cell column name
#42
stemangiola
closed
2 years ago
0
Dev
#41
stemangiola
closed
2 years ago
0
Avoid importing colonnade(), extra_cols() and squeeze()
#40
krlmlr
closed
2 years ago
2
Dev
#39
stemangiola
closed
2 years ago
0
undefine generics
#38
stemangiola
closed
2 years ago
0
Fix multi sample n
#37
stemangiola
closed
3 years ago
0
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