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suchestoncampbelllab
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gwasurvivr
GWAS Survival Package in R
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Error message "length(bed.fn) == 1L is not TRUE"
#38
tlawler2
closed
3 weeks ago
1
Error
#37
gradsmjin814
opened
5 months ago
1
MAF snps_removed is wrong
#36
sheshen22
opened
11 months ago
2
Hadiss debug
#35
aarizvi
opened
1 year ago
0
Allowing for interval survival time
#34
emiuga
opened
1 year ago
1
Create coxParam_intime.R
#33
emiuga
closed
1 year ago
0
empty output file for SNP*covariate interaction
#32
damichalek
opened
1 year ago
3
Including 'cluster' in the coxph call
#31
lucavd
opened
1 year ago
1
The reference of the HR
#30
Ninjahelicopter
opened
1 year ago
5
Error in rowMeans2(genotypes, na.rm = TRUE) : Argument 'dim.' must be an integer vector of length two.
#29
shishirdube99
closed
1 year ago
2
Devel
#28
aarizvi
opened
1 year ago
0
Error in plinkCoxSurv - could not find function "coxph.fit"
#27
zhaiting
closed
1 year ago
12
Error in genotypes[!blankSNPs, cox.params$ids] : subscript out of bounds
#26
lucavd
closed
2 years ago
1
number of SNPs analyzed in total is blank at the end of analysis
#25
tesselgalesloot
opened
2 years ago
4
Error in genotypes[!blankSNPs, cox.params$ids] : subscript out of bounds
#24
DC-Zhao-yu
closed
1 year ago
0
On which allele the HR is calculated, depending on the flip.dosage option?
#23
antgiord
opened
2 years ago
3
question about "low variance"
#22
DrGojiMori
opened
3 years ago
1
input format for gwasurvivr
#21
mightyphil2000
closed
1 year ago
1
No covariates and effect allele documentation
#20
aarizvi
opened
3 years ago
3
Error in genotypes[!blankSNPs, cox.params$ids] : subscript out of bounds
#19
yard2357
opened
3 years ago
4
Flip dosage
#18
LivUllmann
closed
1 year ago
1
Devel
#17
aarizvi
closed
3 years ago
0
Prerefactortest
#16
MarkPlatts
closed
3 years ago
0
question about chunk.size
#15
cz354
closed
3 years ago
4
Add unit tests prior and refactored code with object oriented design
#14
MarkPlatts
closed
3 years ago
2
Add unit tests prior to refactoring into classes
#13
MarkPlatts
closed
3 years ago
1
Error in open.TabixFile(vcf) : 'indexname' must be character(1)
#12
pmk2020
closed
1 year ago
1
Regarding to a function for PH assumption test and interpretation for resulting files
#11
injeongshim
opened
4 years ago
0
Error in if (nrow(genotypes) > 0) { : argument is of length zero
#10
injeongshim
closed
4 years ago
2
sangerCoxSurv fails in tutorial
#9
hhg7
closed
4 years ago
2
Can we use multiple IDs?
#8
Qiaolan
closed
4 years ago
3
gwasurvivr and R "survival" package give different results
#7
Qiaolan
closed
4 years ago
3
Error in rnorm(nrow(cox.params$pheno.file)) : invalid arguments
#6
Marie-McM
opened
4 years ago
12
Error in snpgdsBED2GDS(bed.file, fam.file, bim.file, gdsfile, cvt.chr = "int",
#5
hamishinnes
closed
4 years ago
2
Error in genotypes[!blankSNPs, cox.params$ids] : subscript out of bounds
#4
hamishinnes
closed
4 years ago
15
Add check for NA
#3
karaesmen
closed
6 years ago
0
interaction doesn't work
#2
karaesmen
closed
6 years ago
1
Final
#1
karaesmen
closed
6 years ago
0