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suzannelab
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Dissect
Library to segment, explore and analyse networks, cells and tissues.
Mozilla Public License 2.0
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image_aniso error
#41
TatiaM
opened
10 months ago
1
Face_intensity doesn't do want we want
#40
sophietheis
closed
2 years ago
0
Update Network
#39
TatiaM
closed
2 years ago
0
Segmentation class creation
#38
sophietheis
closed
2 years ago
0
Improve code
#37
sophietheis
closed
2 years ago
0
Networks functions and some corrections
#36
TatiaM
closed
2 years ago
0
junction length measurement function
#35
TatiaM
closed
2 years ago
0
Length measurement function in 2.5D
#34
TatiaM
closed
2 years ago
1
Standardize parameters name
#33
sophietheis
opened
2 years ago
0
Modifications for length measurements. Need of a smooth (hence float) skeleton
#32
TatiaM
closed
2 years ago
0
Update notebook analyse comparative
#31
sophietheis
closed
3 years ago
0
Convex hull over-estimate cell area
#30
sophietheis
opened
3 years ago
0
Tiff register
#29
sophietheis
opened
3 years ago
1
Improve 3D segmentation and analysis
#28
sophietheis
closed
3 years ago
0
Update seg_2D.py
#27
TatiaM
closed
3 years ago
0
Clean 3D
#26
sophietheis
closed
3 years ago
0
Add HitandMiss function in 2D with pattern csv file to find vertices …
#25
TatiaM
closed
3 years ago
0
update boundary_auto_remove
#24
TatiaM
closed
3 years ago
1
Boundary cells removal
#23
TatiaM
closed
3 years ago
0
Remove boudary cells in the segmentation function
#22
TatiaM
closed
3 years ago
2
Initiate docker disperse demo notebook
#21
sophietheis
closed
3 years ago
0
Add 3D segmentation
#20
sophietheis
closed
3 years ago
1
Vertices function improvement
#19
TatiaM
closed
3 years ago
0
3D segmentation
#18
sophietheis
closed
3 years ago
0
Correction of the method 'remove_free_filament' from the Skeleton class.
#17
TatiaM
closed
3 years ago
0
Improve load_NDskl time execution
#16
sophietheis
closed
3 years ago
0
Proposition: Segmentation function 02 with a maximum number of pixels for a cell
#15
TatiaM
closed
3 years ago
4
Add demo notebook
#14
sophietheis
closed
3 years ago
0
New function junctions_stats
#13
TatiaM
closed
3 years ago
0
Change the output for `mesh_generation`, adapt for 2.5D tissue
#12
sophietheis
closed
3 years ago
0
Define 2D mesh information, more precisely vertex and edge
#11
TatiaM
closed
3 years ago
0
Modification de cellstats
#10
TatiaM
closed
3 years ago
2
Modification de junction_around_cell dans seg_2D.py
#9
TatiaM
closed
3 years ago
1
Code Refactorisation
#8
sophietheis
closed
4 years ago
0
Petite modification de run_disperse
#7
TatiaM
closed
4 years ago
0
Non autonomus otsufilter function
#6
sophietheis
closed
3 years ago
2
Corrections des fonctions de base de Dissect2D (run_disperse, junc_ar…
#5
TatiaM
closed
4 years ago
0
Update analysis.py, disperse.py, and 6 more files...
#4
TatiaM
closed
4 years ago
0
disperse function
#3
TatiaM
closed
4 years ago
0
PR-2
#2
TatiaM
closed
4 years ago
0
PR-test1
#1
TatiaM
closed
4 years ago
0