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timothy-barry
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ondisc
Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.
https://timothy-barry.github.io/ondisc/
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Fail more gracefully when trying to access row within .odm file that does not exist.
#27
timothy-barry
opened
1 week ago
0
“read_odm” function has been removed from current version ？
#26
L1angyan
closed
2 months ago
13
Add an input check that all guides within a vector have the same target
#25
ekatsevi
closed
4 months ago
1
Summer 2022
#24
timothy-barry
closed
7 months ago
0
Investigate memory usage of `create_ondisc_matrix_from_mtx`
#23
timothy-barry
closed
2 years ago
2
Increase R requirement to 4.1.
#22
timothy-barry
closed
2 years ago
0
Add support for `ngCMatrix` input to `create_ondisc_matrix_from_R_matrix`
#21
ekatsevi
closed
7 months ago
0
Add feature_access_only
#20
Samson-Dai
closed
1 year ago
0
Solve Gene's Issue
#19
Samson-Dai
closed
2 years ago
2
Input format for create_ondisc_matrix_from_R_matrix()
#18
ekatsevi
closed
2 years ago
2
Code cleaning
#17
Samson-Dai
closed
2 years ago
0
Update documentation
#16
Samson-Dai
closed
2 years ago
0
Completed the h5_list function
#15
Samson-Dai
closed
2 years ago
0
Improving the generality of create_ondisc_matrix_from_mtx and run_core_algo
#14
Samson-Dai
closed
2 years ago
0
Revert "Merge pull request #11 from timothy-barry/revert-10-main"
#13
Samson-Dai
closed
2 years ago
0
Update high_level_initialize.R
#12
Samson-Dai
closed
2 years ago
1
Revert "Read list of .mtx files"
#11
timothy-barry
closed
2 years ago
0
Read list of .mtx files
#10
Samson-Dai
closed
2 years ago
1
Update ondisc vignette to use `create_ondisc_matrix_from_R_matrix`
#9
ekatsevi
closed
2 years ago
0
Modify in_memory write to .h5 file function
#8
Samson-Dai
closed
3 years ago
0
Add create_ondisc_matrix_from_R_matrix
#7
Samson-Dai
closed
3 years ago
2
Add create_ondisc_matrix_from_R_matrix
#6
Samson-Dai
closed
3 years ago
0
Let temp_test_dir be different in each run of helper functions
#5
yixuan
closed
3 years ago
0
Add create_ondisc_matrix_from_R_matrix
#4
Samson-Dai
closed
3 years ago
0
Cannot create matrix
#3
yihan1119
closed
3 years ago
13
Some tweaks
#2
yixuan
closed
3 years ago
1
Rewrite get_mtx_metadata()
#1
yixuan
closed
3 years ago
1