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treangenlab
/
emu
MIT License
34
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get_cigar_op_log_probabilities bug
#32
ccoo22
opened
3 weeks ago
0
Segmentation fault - exit status 139 during minimap stage - v3.5.0
#31
NickJD
closed
1 week ago
5
Would you recommend subsampling reads across samples?
#30
ayamakawa
opened
1 month ago
1
Nanopore 16S read preprocessing
#29
Kav57
opened
1 month ago
3
unclassified mapped reads
#28
microanshi
closed
1 month ago
1
Combine-output 'species' issue
#27
abbyf1120
closed
1 month ago
2
Min abundence question
#26
EsbergA
closed
1 month ago
1
Taxonomy classification with different DB
#25
ntromas
closed
1 month ago
1
Distinguish between unmapped and unclassified
#24
kdc10
closed
2 months ago
0
Problems with output file with unclassified sequences
#23
ayamakawa
closed
1 month ago
6
How to find which refseq the sequence got matched ?
#22
arpit20328
closed
1 month ago
1
How are novel species annotated?
#21
ashleyp1
closed
1 month ago
3
ReadID does not match the read-assignment-distributions
#20
AmstlerStephan
opened
2 months ago
3
Update README.md
#19
kdc10
closed
2 months ago
0
errors with collapse-taxonomy
#18
lucacozzuto
closed
2 months ago
4
add option to force minimap2 to consider the forward transcript
#17
jodjo86
closed
3 months ago
0
Speedup EMU for long cDNA reads
#16
jodjo86
closed
3 months ago
2
Update emu default db
#15
cdvogela
closed
2 months ago
3
fastq for ONT?
#14
jvpon
closed
3 months ago
1
Error with custom database
#13
rjain1990
closed
4 months ago
2
Emu run
#12
shysol4u
closed
4 months ago
3
Error with database ncbi_16s_18s_28s
#11
aggath
closed
5 months ago
1
ModuleNotFoundError: No module named 'pysam'
#10
DorotheeBerthold
closed
4 months ago
1
Sequences of tax-id
#9
paddyhooper
closed
4 months ago
4
Question about LCA
#8
Pstege
closed
4 months ago
1
Some open questions
#7
arpit20328
closed
4 months ago
1
Secondary alignments for short reads
#6
TheDBStern
closed
4 months ago
1
keep counts question
#5
Thomieh73
closed
7 months ago
2
Short Read single and paired end Emu Command Line
#4
arpit20328
closed
4 months ago
1
Custom database UNITE fungi update
#3
moniwaldherr
closed
4 months ago
3
widen error for log likelihood decrease
#2
kdc10
opened
1 year ago
0
File detection sll13
#1
Slimsammylim
opened
1 year ago
0