usegalaxy-eu project-ideas issues

usegalaxy-eu / project-ideas

A collection of project ideas suitable for Master and Bachelor students

MIT License

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issues

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[WIP] Integrate elabftw into Galaxy

#45 bgruening opened 3 weeks ago
0
Design and Illustrate visually appealing poster for the Galaxy Project

#44 ElectronicBlueberry opened 4 months ago
1
Integrating MAPIE to have prediction intervals of classifiers and regressors to Galaxy ML tools

#43 anuprulez opened 4 months ago
0
Contribute to Open Source projects

#42 bgruening opened 5 months ago
0
Metagenomic Amplicon Visualization Workflow / Tutorial

#41 paulzierep opened 5 months ago
0
Systematic tool testing / validation

#40 tuncK closed 5 months ago
0
Extending API coverage of Galaxy and bioblend and comparing auto-generated language bindings with handcrafted ones.

#39 bgruening closed 5 months ago
0
Improving tool wrapper testing contraptions

#38 tuncK opened 1 year ago
0
Combining gene cluster detection with metatranscriptomics analysis

#37 paulzierep opened 1 year ago
0
Testing and updating tutorials for data analysis

#36 bebatut opened 1 year ago
0
Implementation of a pipeline for producing seasonal Arctic Sea ice forecasts using IceNet

#35 annefou closed 5 months ago
12
Implementation of ERGA genome post-assembly pipeline

#34 gallardoalba opened 1 year ago
0
Evaluation of a workflow to build genomes from metagenomic data

#33 bebatut opened 1 year ago
0
Beer microbiome data analysis

#32 bebatut opened 1 year ago
0
Port a pipeline for microbiome data analysis to Galaxy

#31 bebatut opened 2 years ago
0
Development of a Galaxy pipeline for detection of SARS-CoV-2 variants in wastewater samples

#30 bebatut opened 2 years ago
0
Creating a tutorial for microbiome / metagenomics data analysis

#29 bebatut opened 2 years ago
1
Development of a Python tool to compare public Galaxy histories and implementation of an automated scoring system for an online & interactive game

#28 bebatut opened 2 years ago
1
develop a notification system for the Galaxy webapp

#27 bgruening closed 5 months ago
0
Scaling up and automating the resource allocation for global Galaxy training events

#26 beatrizserrano opened 2 years ago
0
Develop the infrastructure to support CAMI (metagenomics) challenges in Galaxy

#25 bebatut opened 2 years ago
0
Reproducing CAMI (metagenomics) challenges in Galaxy

#24 bebatut opened 2 years ago
0
Implementing a prototype to automatically create and display learning paths in an e-learning platform

#23 bebatut closed 5 months ago
0
Implementation of the infrastructure for an online & interactive game on DNA data analysis

#22 bebatut opened 2 years ago
0
Investigating and benchmarking distributed filesystems for the European Galaxy server

#21 bgruening opened 3 years ago
0
Linkage Analysis Pipeline and Training in Galaxy

#20 mtekman closed 4 years ago
1
GGplot2 in Galaxy

#19 mtekman closed 4 years ago
3
Chemical property prediction with machine learning on the Galaxy platform

#18 simonbray closed 2 years ago
2
Advanced CLI program to schedule scientific workflows across Europe

#17 bgruening closed 2 years ago
1
Implement a Bayesian optimisation based hyperparameter search method to Galaxy machine learning tools suite

#16 anuprulez closed 4 months ago
1
Haplotype visualisation into Galaxy

#15 mtekman closed 4 years ago
1
Linkage Analysis Pipeline in Galaxy

#14 mtekman closed 4 years ago
1
Developing continuous integration tests for ansible based cloud deployments

#13 bgruening opened 4 years ago
0
Webservice to crawl/search scientific workflows globally

#12 bgruening opened 5 years ago
2
Intelligent search for Galaxy using machine learning and search-engines

#11 anuprulez closed 5 months ago
0
PostgreSQL analysing and optimization

#10 bgruening opened 5 years ago
0
Expand DESeq2 integration into Galaxy

#9 bebatut opened 5 years ago
0
Automatic Galaxy report system

#8 bgruening closed 5 months ago
1
Galaxy Docker - the compose story

#7 bgruening opened 5 years ago
0
extend, deploy and test pulsar job executions in the cloud

#6 bgruening opened 5 years ago
2
Integration of BioJS into Galaxy

#5 joachimwolff closed 5 months ago
4
Unified interface to different Cloud providers

#4 bgruening closed 5 months ago
0
Investigation into the selective pressures behind the reductive genome evolution of the cyanobacteria Prochlorococcus

#3 bebatut closed 1 year ago
0
Study of the genomic characteristic changes related to the reductive genome evolution of the cyanobacteria Prochlorococcus

#2 bebatut closed 1 year ago
0
Add template for the issues

#1 bebatut closed 7 years ago
0