uw-ipd RoseTTAFold2NA issues

uw-ipd / RoseTTAFold2NA

RoseTTAFold2 protein/nucleic acid complex prediction

MIT License

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issues

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Run RNA prediction error

#22 lj734999889 opened 1 year ago
0
The error to predict the protein and RNA structure

#21 lj734999889 closed 1 year ago
1
The maximum number bases for double-stranded DNA

#20 Lyang556 opened 1 year ago
0
A bug in make_rna_msa.sh

#19 HeJonghong opened 1 year ago
3
typo `../run_RF2NA.sh t000_ protein.fa R:rna.fa`

#18 truatpasteurdotfr closed 2 years ago
1
Downloading the RNA database according to README instructions

#17 smturzo closed 2 years ago
1
RNA connected to end of protein

#16 jchap136 opened 2 years ago
3
bug fix on convert "U" to "T"

#15 qiyubio closed 2 years ago
2
This program seems couldn't assemble Nucleosomes properly.

#14 ylx6266 closed 2 years ago
2
RuntimeError: CUDA out of memory.

#13 ylx6266 opened 2 years ago
14
Inconsistent outputs

#12 skyungyong closed 2 years ago
2
Double stranded DNA does not fold properly

#11 luukhd2 closed 2 years ago
1
Broekn link - https://files.ipd.uw.edu/pub/RoseTTAFold/pdb100_2021Mar03.tar.gz

#10 YaronBSG closed 2 years ago
1
example possible failure `conda activate RF2NA && ../run_RF2NA.sh t000_ protein.fa R:RNA.fa`

#9 truatpasteurdotfr closed 2 years ago
2
run RNA prediction error

#8 fengzk0425 opened 2 years ago
1
possible mistake in make_rna_msa.sh

#7 DimaMolod closed 2 years ago
3
weights size mismatch

#6 heejongkim closed 2 years ago
2
Trying to model homodimer results in two monomers in same space.

#5 ramjet10 opened 2 years ago
14
RNA alphabet error

#4 mpacella88 closed 2 years ago
1
what is version.txt.gz and how can we find it?

#3 YaoYinYing closed 2 years ago
1
Password

#2 S-m-Baffoe closed 2 years ago
2
open source data?

#1 pengzhangzhi closed 2 years ago
2