vanvalenlab deepcell-tf issues

vanvalenlab / deepcell-tf

Deep Learning Library for Single Cell Analysis

https://deepcell.readthedocs.io

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Missing data for 3D Nuclear Segmentation - Deep Watershed tutorial

#734 MariekeL opened 6 days ago
0
Mesmer flaky instantiation on HPC cluster

#733 colganwi opened 2 months ago
2
Magnification in TissueNet Dataset

#732 lsnls closed 2 months ago
2
Training segmentation example notebook fixes

#731 raffeyC opened 2 months ago
0
https www.ethiomesmer.com

#730 251925209391 closed 3 months ago
1
DOC: Update application examples with from_version

#729 rossbar closed 2 months ago
0
Unable to access nuclear segmentation and cell tracking models in Caliban-Application notebook tutorial

#728 cdsyou closed 3 months ago
7
Prepare 0.12.10 release

#726 rossbar closed 3 months ago
2
New release for deepcell

#725 msschwartz21 opened 3 months ago
0
API token

#724 mezwick closed 3 months ago
2
How to combine multiple membrane/cytoplasm channels?

#723 bswhite closed 4 months ago
2
deepcell API docs do not have any content

#722 msschwartz21 opened 4 months ago
3
Update DNN dataset and Caliban models

#721 msschwartz21 closed 4 months ago
0
API Token

#720 sittnerr closed 4 months ago
2
General maintenance to make CI happy

#719 rossbar closed 5 months ago
1
Correct the axis which temporal merges are applied to in tracking model

#718 msschwartz21 closed 4 months ago
1
ValueError: Input data must have 2 channels. Input data only has 40 channels

#717 wivan993 closed 6 months ago
1
Round cell shapes

#716 auroramaurizio closed 6 months ago
3
interrupted by signal 4: SIGILL

#715 FiReTiTi closed 7 months ago
1
Upgrade (or widen) supported `tensorflow` version

#714 sam-goodwin closed 7 months ago
6
Support for Python 3.11 onward

#713 ChannyClaus closed 8 months ago
2
DeepCell API Key SignUp page responds with a Server Error

#712 adrianomartinelli closed 8 months ago
4
Support for Python 3.11?

#711 dsudar closed 8 months ago
1
Align for multi fov result combined

#710 ustc-fmh closed 9 months ago
1
Error creating segmentation masks for small images

#709 ashishshel opened 9 months ago
3
Rm pins from doc dependencies.

#708 rossbar closed 10 months ago
0
CI: Update action versions and ruff incantation

#707 rossbar closed 10 months ago
1
Add SpotNet v1.1

#706 elaubsch closed 5 months ago
3
MacBook M3 support, DeepCell cannot be installed due to tensorflow version

#705 adrianomartinelli closed 10 months ago
2
Segmentation Mask FIle Issues

#704 tbudiman7 closed 11 months ago
1
Segmentation Mask Output

#703 tbudiman7 closed 11 months ago
1
Access token needed

#702 liuyang2006 closed 11 months ago
1
Retrieve model output without postprocessing

#701 asom opened 11 months ago
0
Question regarding pixel expansion

#700 tbudiman7 opened 1 year ago
1
Nuclear and whole cell segmentation masks identical

#699 megleila opened 1 year ago
4
QUERY : Segmentation Issue

#698 DattaSujayAyyagari closed 1 year ago
2
Getting cell segmentation mask file from Mesmer standalone program

#697 ashishshel closed 1 year ago
1
Link nucleus to whole cell segmentation mask mesmer

#696 janinemelsen closed 1 year ago
3
DOC: Increase gallery thumbnail size

#695 rossbar closed 10 months ago
2
DEEPCELL_ACCESS_TOKEN

#694 mzj0418 opened 1 year ago
8
REL: bump patch for 0.12.9 release.

#693 rossbar closed 1 year ago
0
Make creation of base download location more robust.

#692 rossbar closed 1 year ago
1
MAINT: Fix failing test-docs CI

#691 rossbar closed 10 months ago
2
Minor modification of documentation build to get rid of warnings from inherited docstrings

#690 rossbar closed 1 year ago
1
REL: v0.12.8

#689 rossbar closed 1 year ago
0
Authenticated SpotNet dataset

#688 elaubsch closed 1 year ago
0
Tissuenet dataset instance segmentation ground truth

#687 tsly123 closed 1 year ago
11
Incompatible shape of testing dataset in Nuclear Segmentation notebook

#686 bnovotny closed 1 year ago
6
Apply ruff-0.0.284.

#685 rossbar closed 1 year ago
0