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vibansal
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crisp
Code for multi-sample variant calling from sequence data of pooled or unpooled DNA samples
MIT License
19
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Linker error on Linux
#33
mys721tx
opened
1 year ago
2
Adding gitignore to ignore object files
#32
mys721tx
closed
1 year ago
0
Is it possible to use CRISP to working with low coverage WGS data?
#31
raksasa
closed
1 year ago
1
Feature request: AD field in VCF output
#30
SSmith-NUIG
opened
1 year ago
0
VCF format showing as version 4.0
#29
SSmith-NUIG
opened
1 year ago
0
installation problems
#28
THYeh44
opened
2 years ago
0
Issues with --bed option
#27
Arynio
closed
1 year ago
1
CRISP calling variants outside of the specified bed file
#26
SSmith-NUIG
closed
2 years ago
3
Installation error. does not seem to compile right
#25
tvdwbar
closed
2 years ago
1
Poolsize = 1
#24
arunkumarramesh
closed
3 years ago
1
convert_pooled_VCF
#23
Andrew-N-Black
opened
3 years ago
0
.vcf contains extra tab
#22
jwbusch0
closed
2 years ago
3
Installation Error
#21
virenar
closed
3 years ago
3
Segmentation fault for a specific chromosome
#20
mullerbsf
opened
4 years ago
2
CRISP.binary: corrupted double-linked list
#19
ChinJCheung
closed
3 years ago
6
what is ADb(ADf ADr) tag?
#18
ChinJCheung
closed
4 years ago
0
Compiling samtools from source
#17
mys721tx
closed
4 years ago
0
Segfault and wrong chromosome offset while using --region argument
#16
THYeh44
closed
4 years ago
3
Depth fields
#15
mullerbsf
closed
4 years ago
1
Allele Balance
#14
mullerbsf
opened
4 years ago
7
Missing Data
#13
mullerbsf
closed
4 years ago
3
What parameters should be used for unknown number of samples in a pool?
#12
Buuntu
closed
4 years ago
5
Variant Quality and Variant Pools
#11
abofinal
closed
4 years ago
3
FLANKSEQ is padded with non-printable characters when variant is near the edge
#10
IgnasiLucas
closed
4 years ago
2
Number of reads, allele count and allele frequency
#9
abofinal
closed
5 years ago
2
why can't find AF field for each sample
#8
Yiguan
closed
5 years ago
1
compilation error in ubuntu
#7
IgnasiLucas
closed
5 years ago
1
interpreting vcf file from CRISP
#6
mbxao3
closed
5 years ago
3
output for MLAC tag in vcf
#5
bfairkun
closed
3 years ago
0
Vcf output
#4
PopGenHamburg
closed
6 years ago
4
trouble with running crisp
#3
lixuenan
opened
6 years ago
0
VCF Failing Validations
#2
cfljam
closed
4 years ago
1
Segmentation fault
#1
etwatson
opened
8 years ago
4