issues
search
vinisalazar
/
metaphor
Metaphor: a general-purpose workflow for assembly and binning of metagenomes
https://metaphor-workflow.readthedocs.io/
Other
35
stars
3
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Metaphor `v1.7.17`
#81
vinisalazar
opened
1 week ago
0
DAS tool issue
#80
francesco-ricci
opened
1 week ago
4
Metaphor `v1.7.13`
#79
vinisalazar
closed
1 week ago
0
Metaphor `v1.7.12`
#78
vinisalazar
closed
2 weeks ago
0
vamb: error: unrecognized arguments: --jgi output/mapping/cobinning/bam_contigs_depths.txt
#77
francesco-ricci
opened
3 weeks ago
7
display X server
#76
eachraf
opened
1 month ago
1
vamb issue
#75
francesco-ricci
closed
2 weeks ago
7
ModuleNotFoundError: No module named 'vbgmm'
#74
francesco-ricci
closed
1 month ago
8
Clarify No. bp in assembly_report.tsv
#73
s-junguy
closed
2 months ago
2
Which minimap2 version is running?
#72
s-junguy
closed
2 months ago
4
Merge branch 'dev' into 'main' - Metaphor `v1.7.11`
#71
vinisalazar
closed
4 months ago
0
metaphor test errors
#70
mariafpv
closed
2 months ago
9
Clarification on Prokka annotation within metaphor
#69
KatharinaHoff
closed
2 months ago
5
Error in rule concatenate_contigs
#68
francesco-ricci
closed
4 months ago
14
Merge branch `dev` into `main` - Metaphor v1.7.10
#67
vinisalazar
closed
5 months ago
0
Update main.yml
#66
vinisalazar
closed
5 months ago
0
Fastqc error
#65
francesco-ricci
closed
4 months ago
6
Metaphor test issue
#64
francesco-ricci
closed
4 months ago
2
Waiting at most 5 seconds for missing files
#63
viksiem
closed
7 months ago
3
Error in rule fastqc_raw
#62
s-junguy
closed
4 months ago
9
Merge branch 'dev' into 'main' - `v1.7.9`
#61
vinisalazar
closed
9 months ago
0
package das_tool could not be installed
#60
s-junguy
closed
9 months ago
2
Metaphor execution cancelled
#59
o-enric
closed
4 months ago
8
handling of blank/control samples
#58
ganiatgithub
closed
4 months ago
2
Error in rule megahit
#57
viksiem
closed
10 months ago
3
Merge branch 'dev' into 'main' - `v1.7.8`
#56
vinisalazar
closed
10 months ago
0
AttributeError: Rectangle.set() within plot_cog_taxonomy
#55
ganiatgithub
closed
10 months ago
5
iteritems in bins_report.py
#54
ganiatgithub
closed
10 months ago
2
configuring threads/cores in local run
#53
Perugolate
closed
10 months ago
1
Error while installing metaphor in a new device
#52
BioInfoStar5
closed
10 months ago
4
Error while running "metaphor test" command line
#51
BioInfoStar5
closed
11 months ago
11
maybe related to concatenate.py
#50
ganiatgithub
closed
1 year ago
5
checkpoint function or restart
#49
ganiatgithub
closed
1 year ago
6
Merge branch 'stage' into 'main' - `v1.7.7`
#48
vinisalazar
closed
1 year ago
2
Weird taxa abundance plots
#47
camilogarciabotero
closed
1 year ago
9
Merge branch `stage` into `main` - `v1.7.6`
#46
vinisalazar
closed
1 year ago
0
Latex module fails when making reports
#45
camilogarciabotero
closed
1 year ago
3
Error in No such file or directory: 'y'
#44
ganiatgithub
closed
1 year ago
2
Missing output during test run
#43
ganiatgithub
closed
1 year ago
6
Merge branch 'stage' into 'main' - `v1.7.5`
#42
vinisalazar
closed
1 year ago
0
Merge branch 'stage' into 'main' - `v1.7.4`
#41
vinisalazar
closed
1 year ago
0
Merge branch 'stage' into 'main' - `v1.7.3`
#40
vinisalazar
closed
1 year ago
0
Merge branch 'stage' into 'main' - `v1.7.2`
#39
vinisalazar
closed
1 year ago
0
Merge branch 'stage' into 'main' - `v1.7.1`
#38
vinisalazar
closed
1 year ago
0
Feature names problem when running concoct
#37
francesco-ricci
closed
1 year ago
1
Merge branch 'stage' into 'main' - `v1.7.0`
#36
vinisalazar
closed
1 year ago
0
Merge branch 'stage' into 'main' - `v1.6.2`
#35
vinisalazar
closed
1 year ago
0
Restarting pipeline from broken step
#34
francesco-ricci
closed
1 year ago
2
Issue concatenate_benchmarks
#33
francesco-ricci
closed
1 year ago
4
Merge branch 'stage' into 'main' - `v1.6.1`
#32
vinisalazar
closed
1 year ago
0
Next