will-rowe hulk issues - Githubissues

will-rowe / hulk

Histosketching Using Little Kmers

MIT License

55 stars 4 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Bump github.com/tidwall/gjson from 1.3.0 to 1.9.3

#21 dependabot[bot] closed 1 year ago
0
panic when sketching

#20 jianshu93 opened 2 years ago
1
what input should we have, forward reads or reverse reads or both?

#19 jianshu93 closed 2 years ago
1
question about k-mer frequency

#18 XiaomingXu1995 opened 3 years ago
3
Paired-ended Fastq Input files chosen (foward or reverse ended?), and why the score is not consistent?

#17 Dtdavidgit opened 4 years ago
2
int conversions

#16 will-rowe opened 5 years ago
0
compress homopolymer runs

#15 will-rowe opened 5 years ago
0
add minimizer sketch to the minimizer package

#14 will-rowe opened 5 years ago
0
Swap GOB encoding for MessagePack?

#13 will-rowe closed 5 years ago
1
Add a Binder badge

#12 luizirber closed 5 years ago
1
Dev

#11 will-rowe closed 5 years ago
0
Option to print "smash" to STDOUT?

#10 kyclark opened 5 years ago
2
Sort "smash" sketches for distance matrix

#9 kyclark closed 5 years ago
2
"smash" fails if -d does not end in "/"

#8 kyclark closed 5 years ago
2
Allow "fa" extension for FASTA input

#7 kyclark closed 5 years ago
3
Swap hash

#6 will-rowe closed 5 years ago
0
Possible bug in weighted Jaccard distance calculation

#5 standage closed 5 years ago
2
EncodeSeqFromPreviousKmer would speed up the encoding

#4 shenwei356 closed 5 years ago
4
Error reading sketches: file is corrupted (mismatched file names)

#3 standage closed 5 years ago
3
Support for Fasta input

#2 standage closed 5 years ago
2
Dev

#1 will-rowe closed 6 years ago
0