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wtsi-npg
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samtools_container
Scripts to create a docker container for samtools
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update container image labels
#42
avnishsinghh
closed
1 month ago
0
Consider switching for the non-dev apt package for libssl
#41
jmtcsngr
opened
3 months ago
1
Copy /usr/local from build layer into final layer
#40
jmtcsngr
closed
3 months ago
1
add bgzip in output image and manifest
#39
dkj
closed
3 months ago
0
Creating New user (based on wtsi-npg/p4#337) and switching to it before completion of samtools container
#38
avnishsinghh
closed
3 months ago
0
Creating New user and switching to it before completion of samtools container
#37
avnishsinghh
closed
3 months ago
2
Fix for issue #26, update copy paths
#36
avnishsinghh
closed
3 months ago
2
no change commit to reset devel
#35
jmtcsngr
closed
4 months ago
0
pull from devel to master to prepare release 1.3.0
#34
jmtcsngr
closed
4 months ago
0
samtools/htslib/bcftools 1.20, libdeflate 1.20
#33
dkj
closed
4 months ago
1
Bump docker/login-action from 2 to 3
#32
dependabot[bot]
closed
4 months ago
0
Bump jlumbroso/free-disk-space from 1.3.0 to 1.3.1
#31
dependabot[bot]
closed
5 months ago
0
Bump docker/setup-buildx-action from 2 to 3
#30
dependabot[bot]
closed
4 months ago
0
Bump ncipollo/release-action from 1.12.0 to 1.14.0
#29
dependabot[bot]
closed
4 months ago
0
add configuration for dependabot
#28
jmtcsngr
closed
5 months ago
0
pull from devel to master to prepare release 1.2.1
#27
jmtcsngr
closed
5 months ago
0
Copy from /tmp should be unnecessary after make install
#26
kjsanger
closed
3 months ago
1
Add missing irods-runtime apt package to final layer of image
#25
jmtcsngr
closed
5 months ago
0
Copying /opt/irods-externals should not be necessary
#24
kjsanger
opened
6 months ago
1
Avoid copying Debian packaged libraries from one image to another
#23
kjsanger
closed
5 months ago
1
Missing essential files for irods pluggings from final layer
#22
jmtcsngr
closed
5 months ago
1
pull from devel to master to prepare release 1.2.0
#21
jmtcsngr
closed
6 months ago
0
Expose md5fa executable
#20
jmtcsngr
closed
6 months ago
0
pull from devel to master to prepare release 1.1.0
#19
jmtcsngr
closed
6 months ago
0
expose seq_cache_populate.pl as executable
#18
jmtcsngr
closed
6 months ago
2
expose more executables
#17
jmtcsngr
closed
6 months ago
1
add tag instructions to README
#16
jmtcsngr
opened
6 months ago
3
update README.md output of `list` is plain text
#15
jmtcsngr
closed
6 months ago
0
pull from devel to master to create release 1.0.4
#14
jmtcsngr
closed
6 months ago
0
use checkout@v4 in actions
#13
jmtcsngr
closed
6 months ago
0
add missing libcurl4 runtime dependency
#12
jenniferliddle
closed
6 months ago
0
add missing libcurl4 runtime dependency
#11
dkj
closed
6 months ago
0
BASE_IMAGE argument to Docker build is not used/ignored
#10
kjsanger
opened
6 months ago
0
Update version numbers
#9
jenniferliddle
closed
6 months ago
0
Release build failure
#8
kjsanger
closed
6 months ago
3
Initial version (part two) incorporating review suggestions from kdj
#7
jenniferliddle
closed
6 months ago
0
iRODS irods:/ URI support
#6
dkj
closed
6 months ago
1
Container should drop root
#5
kjsanger
closed
3 months ago
1
libdeflate support?
#4
kjsanger
closed
6 months ago
1
Image needs a multi-stage build
#3
kjsanger
closed
6 months ago
2
Singularity scripts need updating
#2
kjsanger
closed
6 months ago
1
Redundant build-args in Makefile
#1
kjsanger
closed
6 months ago
1