xjtu-omics SVision issues

xjtu-omics / SVision

Detecting genome structural variants with deep learning in single molecule sequencing

GNU General Public License v3.0

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issues

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Example Reference Sequence

#38 mumdark opened 1 week ago
0
truvari指标

#37 Bigdata20688 opened 1 month ago
5
安装问题

#36 AiWoZhongHua011002 opened 2 months ago
1
save_restore_tensor.cc:175

#35 asylvz closed 2 months ago
3
Question about liftover

#34 gambalab closed 3 weeks ago
1
Detection inversion

#33 MinjaYuan closed 3 months ago
0
[Solved] ERROR: Failed building wheel for opencv-python-headless

#32 Carry-Pt opened 7 months ago
0
Run SVision on a pseudo-chromosome

#31 vegetableyu opened 8 months ago
1
The CNN model website cannot be accessed

#30 kllzhu opened 9 months ago
4
Using SVision to detect variations in tandem repeats

#29 CSU-KangHu opened 10 months ago
1
Can't run SVision with TypeError after installed from anaconda in Unbuntu

#28 jackzhong1995 closed 7 months ago
2
Structural variation of species from two different genus

#27 XXboop closed 1 year ago
0
FileNotFoundError: [Errno 2] could not open alignment file

#26 Ural-Yunusbaev closed 7 months ago
1
Confused information in the log file

#25 JhinAir closed 7 months ago
1
Takes forever to run

#24 tnnandi closed 7 months ago
1
"Empty output in the score file!!! Program exit"

#23 jamesdalg opened 1 year ago
11
AttributeError: 'pysam.libcalignmentfile.AlignmentFile' object has no attribute 'get_index_statistics'

#22 tnnandi opened 1 year ago
1
chm13 support

#21 jamesdalg closed 1 year ago
1
No bed file

#20 masterzhen119 opened 1 year ago
1
Question about the result

#19 kedduck closed 1 year ago
6
can't install on mac

#18 proukakis closed 7 months ago
4
License issue

#17 panosalevropoulos opened 1 year ago
0
ALT sequence for insertions

#16 jo-mc closed 1 year ago
2
Has it been tried in other diploid animals.

#15 netwon123 closed 7 months ago
2
Models trained on (polyploid) plants planned?

#14 KewinOgink closed 7 months ago
1
SV simulation issues

#13 leedchou closed 7 months ago
1
SV description

#12 bo8883 opened 2 years ago
1
SV description confusion regarding the difference between DUP and tDUP

#11 bo8883 closed 7 months ago
1
Multi-sample option

#10 YahGao closed 2 years ago
2
Docker error response from daemon

#9 YenlingPeng opened 2 years ago
1
SVision runs too slow...

#8 zer0127 opened 2 years ago
15
Unknown INFO field: VAF when add --cluster

#7 rxw125 closed 2 years ago
2
是否适合非模式物种的SV检测？

#6 biozzq closed 2 years ago
3
ValueError while running the tool

#5 Pigrenok opened 2 years ago
14
Assembled sequence in FASTA format as input.

#4 Pigrenok closed 2 years ago
3
ERROR: No matching distribution found for pyvcf 0.6.8

#3 yongyongkang closed 2 years ago
1
Adding checkpoint for step1 and step2

#2 baozg opened 2 years ago
0
Empty result when using contig mode

#1 baozg closed 2 years ago
7