issues
search
yanwu2014
/
swne
Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets
BSD 3-Clause "New" or "Revised" License
103
stars
20
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
SWNE bioconductor compatability
#35
AlexCHoppe
closed
11 months ago
0
there is a error in "RunSWNE(obj, k = 16, genes.embed = genes.embed)"
#34
Tycooner
opened
1 year ago
0
how to use contour.geom in PlotSWNE
#33
chengwenxuan1997
closed
1 year ago
0
hemato_swne_pseudotime_plot fail to function
#32
georgewu1999
opened
3 years ago
0
re variable genes used does not match
#31
haircell
opened
3 years ago
0
Seurat- SCTransform compatibility?
#30
mr-september
closed
3 years ago
4
Error running RunSWNE
#29
RuiyuRayWang
closed
3 years ago
2
Transferring metadata from a Seurat object into SWNE
#28
pbrazda
closed
3 years ago
1
installation error
#27
xuebaliang
closed
3 years ago
7
Fixed duplicate word on paragraph 09
#26
kant
closed
4 years ago
1
Error in as(object@graphs$RNA_snn, "dgCMatrix")
#25
trueth1206
closed
5 years ago
4
Same code, different SWNE imbeddings
#24
hgb1111
closed
5 years ago
1
Seurat V3 Workflow
#23
hgb1111
closed
5 years ago
13
Bringing a seurat v3 object into SWNE
#22
hgb1111
closed
5 years ago
2
Unable to replicate results for SWNE Walkthrough using Seurat
#21
JoannaTan
closed
5 years ago
13
Offical Seurat 3.0 Tutorial
#20
MediciPrime
closed
5 years ago
2
SWNE plotting on Tabular Data
#19
Saini-96
closed
5 years ago
8
Error during execution of "Gene Expression Quickstart with Seurat"
#18
darrentyson
closed
5 years ago
2
Unlisted dependencies
#17
darrentyson
closed
5 years ago
2
OpenBLAS Warning for FindNumFactors
#16
MediciPrime
closed
5 years ago
3
added Suerat compatibility (return object)
#15
TomKellyGenetics
closed
5 years ago
1
Installation error -- Velocyto
#14
jebard
closed
5 years ago
2
fix matrix processing with RunSWNE
#13
TomKellyGenetics
closed
5 years ago
0
Improvements to RunSWNE Wrapper
#12
TomKellyGenetics
closed
5 years ago
1
some bugs in testing "1. A basic walkthrough of 3k PBMC cells starting from a pre-computed Seurat object."
#11
Shiywa
closed
6 years ago
3
Implement Methods for RunSWNE
#10
TomKellyGenetics
closed
6 years ago
0
Formatting issue in error message
#9
TomKellyGenetics
closed
6 years ago
1
Change in behaviour (output) of FindNumFactors
#8
TomKellyGenetics
closed
6 years ago
4
Add a wrapper function RunSWNE
#7
TomKellyGenetics
closed
6 years ago
5
primary steps uploading seurat object
#6
mooreann
closed
6 years ago
15
Add remote dependancies to installation
#5
TomKellyGenetics
closed
6 years ago
1
SWNE plotting of samples subsets
#4
terooatt
closed
6 years ago
2
mitochondrial/UMI regression
#3
dylanmr
closed
6 years ago
1
EmbedSWNE fails
#2
bobermayer
closed
6 years ago
2
Error with k=2
#1
scharch
closed
6 years ago
1