yhwu idemp issues - Githubissues

yhwu / idemp

Barcode demultiplex for Illumina I1, R1, R2 fastq.gz files

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All reads are undecoded

#18 aminards opened 2 years ago
2
two or more barcodes point to the same sampleID

#17 pandan74 opened 3 years ago
1
Query: Can we use this for single cell illumina files?

#16 shashj closed 4 years ago
2
Read names are same:

#15 vincebilly opened 4 years ago
1
Empty sequence leads to corrupt demultiplexed fastq file

#14 skembel opened 5 years ago
1
error: Can't open path/to/data/input_R1.fastq.gz_sample.fastq.gz

#13 morien opened 5 years ago
6
barcodes in R1 and R2

#12 AgustinPardo opened 5 years ago
3
Index file / read file discrepancies

#11 eolesin opened 5 years ago
2
Allowed base mismatches

#10 AgustinPardo opened 6 years ago
1
add barcode to read name

#9 jthomas5062 opened 6 years ago
1
Output Files

#8 emilyjunkins opened 6 years ago
1
Something wrong (different number of reads written and reads that should be written)

#7 nailabc closed 6 years ago
2
Unequal size output fastq files

#6 cheng0712 opened 7 years ago
5
Demultiplexing large sequencing runs split amongst multiple output files (multiple R1/R2/R3 .fastq)

#5 JacobRPrice opened 7 years ago
1
Suppress lines of .decode file that have illegal memory access

#4 wltrimbl closed 7 years ago
0
trouble demultiplexing

#3 reidgrahamgriggs opened 7 years ago
1
Some barcodes lead to unitialized data seg fault

#2 wltrimbl opened 8 years ago
3
reverse complement of barcode

#1 ikardail opened 9 years ago
1