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The Biovalidator service is throwing a 504 Gateway Timeout error when the `accessions` field is included in the payload for validation, e.g., `"accessions": ["SAMEA2397676"]`. The issue appears to be …
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In the current mztab, the protein inference is removed. I think it is a good idea to put all the proteins in the protein group at the psm level.
The current proposal at PSM level stores the follow…
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neighbourhood is a set of groupings outside of the single inheritance hierarchy so should be non-ranked.
See files in:
https://allen-brain-cell-atlas.s3.us-west-2.amazonaws.com/index.html#metadata…
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What do you think about using a monospaced font whenever we display accessions? I think that it would make them more recognizable on our website and easier to read.
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Expected Behavior
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After submitting accessions during upload and when I try to navigate to another page in BB, this error…
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Raised here: https://github.com/loculus-project/loculus/issues/2484#issuecomment-2302395408.
At the moment we create ENA projects that are unique for groupId and organism. In ENA there is the optio…
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Are the sample accessions (ENA/SRA experiment accession) and phenotypes available?
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@EvanDietzMorris reported that a large number of HMDB identifiers are missing from cliques. I'll add the full list here for later testing.
Full list of reported missing HMDB identifiers
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H…
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Dear GIAB team
Thanks for gathering all the links here.
It would be super helpful if the SRX accessions are also provided here.
Thank you in advance.
Sina
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We currently have many obsolete UniProt accessions in PHI-base, and we have no effective way to locate the corresponding extant entry for these accessions.
Currently, I think the best we can do is …